RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	MYZAP	P0CAP1	466 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	KRT15	P19012	456 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	HPD	P32754	393 aa	Predicted RBP	13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	BSG	P35613	385 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	PIK3CB	P42338	1070 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	CLCN2	P51788	898 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	HNRNPH2	P55795	449 aa	Known RBP	13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	TAS2R50	P59544	299 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	ZRSR2	Q15696	482 aa	Known RBP	13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	AP5B1	Q2VPB7	878 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	C4orf17	Q53FE4	359 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	RNFT1	Q5M7Z0	435 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	C18orf63	Q68DL7	685 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	SLC25A25	Q6KCM7	469 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	KLC3	Q6P597	504 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	DGAT2L6	Q6ZPD8	337 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	GALNTL5	Q7Z4T8	443 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	SRFBP1	Q8NEF9	429 aa	Known RBP	13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	DNAJB8	Q8NHS0	232 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	MZB1	Q8WU39	189 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	PGM2	Q96G03	612 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	STMN4	Q9H169	189 aa	Predicted RBP	13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	ACBD3	Q9H3P7	528 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	VTI1B	Q9UEU0	232 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	PCTP	Q9UKL6	214 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	ATG4B	Q9Y4P1	393 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	PCDHGA11	Q9Y5H2	935 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	TNPO3	Q9Y5L0	923 aa	Known RBP	13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	USP9X	Q93008	2570 aa	Predicted RBP	13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	ASPDH	A6ND91	283 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	FOXO6	A8MYZ6	492 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	ATP8B1	O43520	1251 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	TMPRSS11D	O60235	418 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	FGF17	O60258	216 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	UNC5C	O95185	931 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	DDAH2	O95865	285 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	IFNA16	P05015	189 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	RBP1	P09455	135 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	COL6A2	P12110	1019 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	TSPAN8	P19075	237 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	CPN2	P22792	545 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	TRHR	P34981	398 aa	Predicted RBP	13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	SSR2	P43308	183 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	TGM3	Q08188	693 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	TRAF3	Q13114	568 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	TERF2	Q15554	542 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	MAPKAPK3	Q16644	382 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	C1QL3	Q5VWW1	255 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	MRM1	Q6IN84	353 aa	Known RBP	13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	MDGA2	Q7Z553	956 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	LCA5	Q86VQ0	697 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	ADAMTS18	Q8TE60	1221 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	DOK4	Q8TEW6	326 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	RGMA	Q96B86	450 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	PPWD1	Q96BP3	646 aa	Known RBP	13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	SCYL1	Q96KG9	808 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	C5orf34	Q96MH7	638 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	FRMD6	Q96NE9	622 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	ROGDI	Q9GZN7	287 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	ADAP2	Q9NPF8	381 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	TMEM216	Q9P0N5	145 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	SENP1	Q9P0U3	644 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	ZNF225	Q9UK10	706 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	MRPS33	Q9Y291	106 aa	Known RBP	13.19	□□□□□ -0.3
EDC4-210	ENST00000575507	ASB4	Q9Y574	426 aa		13.19	□□□□□ -0.3
EDC4-210	ENST00000575507		A0A1W2PR48	441 aa		13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	STX16-NPEPL1	H3BU86	382 aa		13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	STX16	O14662	325 aa		13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	PROM1	O43490	865 aa		13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	UGDH	O60701	494 aa		13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	ZNF354A	O60765	605 aa	Predicted RBP	13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	ITGA10	O75578	1167 aa		13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	CLDN9	O95484	217 aa		13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	CRYAB	P02511	175 aa	Known RBP	13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	GBA	P04062	536 aa		13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	CD46	P15529	392 aa		13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	PTX3	P26022	381 aa	Predicted RBP	13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	SERPINB1	P30740	379 aa		13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	CYB561	P49447	251 aa		13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	HLCS	P50747	726 aa		13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	CDH13	P55290	713 aa		13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	ELAVL1	Q15717	326 aa	Known RBP	13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	METTL2B	Q6P1Q9	378 aa	Known RBP	13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	GFRAL	Q6UXV0	394 aa		13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	VMP1	Q96GC9	406 aa		13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	NTMT1	Q9BV86	223 aa		13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	SEC14L3	Q9UDX4	400 aa		13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	ADGRE2	Q9UHX3	823 aa		13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	SCN2A	Q99250	2005 aa		13.18	□□□□□ -0.3
EDC4-210	ENST00000575507	DOPEY2	Q9Y3R5	2298 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507		A0A0A6YYD5	115 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507		A0A1W2PS29	197 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	GLOD5	A6NK44	160 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507		A8MT66	165 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	HRK	O00198	91 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	FOXE1	O00358	373 aa	Predicted RBP	13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	NME2P1	O60361	137 aa		13.17	□□□□□ -0.3
EDC4-210	ENST00000575507	SLC25A12	O75746	678 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms