RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 ERI3O43414 337 aaKnown RBP8.29□□□□□ -1.08
SMG6-218ENST00000575454 SMPD2O60906 423 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 GUCA1CO95843 209 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 IL18BPO95998 194 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 HRGP04196 525 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 GNAZP19086 355 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 ENDOUP21128 410 aaKnown RBP8.29□□□□□ -1.08
SMG6-218ENST00000575454 SERPINB3P29508 390 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 PIGAP37287 484 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 RPL21P46778 160 aaKnown RBP8.29□□□□□ -1.08
SMG6-218ENST00000575454 HNMTP50135 292 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 GPS1Q13098 491 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 BIKQ13323 160 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 PDAP1Q13442 181 aaKnown RBP8.29□□□□□ -1.08
SMG6-218ENST00000575454 SIX1Q15475 284 aaPredicted RBP8.29□□□□□ -1.08
SMG6-218ENST00000575454 ZNF791Q3KP31 576 aaPredicted RBP8.29□□□□□ -1.08
SMG6-218ENST00000575454 NSUN5P2Q63ZY6 315 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 TRIM40Q6P9F5 258 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 SEM1Q6ZVN7 128 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 CLNKQ7Z7G1 428 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 TMPRSS11BQ86T26 416 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 KRT78Q8N1N4 520 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 FAM47BQ8NA70 645 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 C2CD4AQ8NCU7 369 aaPredicted RBP8.29□□□□□ -1.08
SMG6-218ENST00000575454 TNIP2Q8NFZ5 429 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 LINC01560Q8TB33 94 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 NUBPLQ8TB37 319 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 ANKRD7Q92527 254 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 MS4A6EQ96DS6 147 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 SECISBP2Q96T21 854 aaKnown RBP8.29□□□□□ -1.08
SMG6-218ENST00000575454 NDNQ99608 321 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 BAG1Q99933 345 aaPredicted RBP8.29□□□□□ -1.08
SMG6-218ENST00000575454 CAPS2Q9BXY5 557 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 ROGDIQ9GZN7 287 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 SPNS1Q9H2V7 528 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 COPS7BQ9H9Q2 264 aaPredicted RBP8.29□□□□□ -1.08
SMG6-218ENST00000575454 SH2D2AQ9NP31 389 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 SEMA4BQ9NPR2 832 aaPredicted RBP8.29□□□□□ -1.08
SMG6-218ENST00000575454 IARS2Q9NSE4 1012 aaKnown RBP8.29□□□□□ -1.08
SMG6-218ENST00000575454 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.29□□□□□ -1.08
SMG6-218ENST00000575454 EIF3LQ9Y262 564 aaKnown RBP8.29□□□□□ -1.08
SMG6-218ENST00000575454 CAPN6Q9Y6Q1 641 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 SPACA6W5XKT8 324 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 CPAMD8Q8IZJ3 1885 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 ANKRD33BA6NCL7 494 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 CD8B2A6NJW9 211 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 EEF1E1-BLOC1S5C9J1V9 151 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 TGFBR3LH3BV60 316 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 EEF1E1O43324 174 aaKnown RBP8.28□□□□□ -1.08
SMG6-218ENST00000575454 CLEC3AO75596 197 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 FGGP02679 453 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 C1GALT1C1LP0DN25 315 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 BMP7P18075 431 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 CTSSP25774 331 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 PCSK6P29122 969 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 KCNJ1P48048 391 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 HNRNPFP52597 415 aaKnown RBP8.28□□□□□ -1.08
SMG6-218ENST00000575454 PLA2G16P53816 162 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 MTTPP55157 894 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 CDKN2DP55273 166 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 LIM2P55344 173 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 EEF1A1P68104 462 aaKnown RBP8.28□□□□□ -1.08
SMG6-218ENST00000575454 TIAL1Q01085 375 aaKnown RBP eCLIP8.28□□□□□ -1.08
SMG6-218ENST00000575454 ASPHQ12797 758 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 Q5PR19 223 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 TBCELQ5QJ74 424 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 EEF1A1P5Q5VTE0 462 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 TMIGD1Q6UXZ0 262 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 CXorf67Q86X51 503 aaPredicted RBP8.28□□□□□ -1.08
SMG6-218ENST00000575454 KRTAP1-3Q8IUG1 177 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 RASGEF1CQ8N431 466 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 NAXEQ8NCW5 288 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 SRFBP1Q8NEF9 429 aaKnown RBP8.28□□□□□ -1.08
SMG6-218ENST00000575454 OR2L5Q8NG80 312 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 SLC2A12Q8TD20 617 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 CCT6BQ92526 530 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 NTNG2Q96CW9 530 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 SPACA9Q96E40 222 aaPredicted RBP8.28□□□□□ -1.08
SMG6-218ENST00000575454 PDLIM5Q96HC4 596 aaKnown RBP8.28□□□□□ -1.08
SMG6-218ENST00000575454 CAPZA3Q96KX2 299 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 ART5Q96L15 291 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 RUNDC3BQ96NL0 473 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 SERPINB12Q96P63 405 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 TIMP4Q99727 224 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 REXO4Q9GZR2 422 aaKnown RBP8.28□□□□□ -1.08
SMG6-218ENST00000575454 PRDM14Q9GZV8 571 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 NT5DC2Q9H857 520 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 CALHM2Q9HA72 323 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 LYRM4Q9HD34 91 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 NDRG3Q9UGV2 375 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 CORO1CQ9ULV4 474 aaPredicted RBP8.28□□□□□ -1.08
SMG6-218ENST00000575454 DAPP1Q9UN19 280 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 SLC22A14Q9Y267 594 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 IKBKGQ9Y6K9 419 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 INTS1Q8N201 2190 aaKnown RBP8.28□□□□□ -1.08
SMG6-218ENST00000575454 HIVEP2P31629 2446 aa8.28□□□□□ -1.08
SMG6-218ENST00000575454 CTAGE15A4D2H0 777 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 ANKDD1BA6NHY2 528 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 LRRC3CA6NJW4 275 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 CAPN14A8MX76 684 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms