RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 ZNF169Q14929 603 aaPredicted RBP8.09□□□□□ -1.11
SMG6-216ENST00000575176 EXT1Q16394 746 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 ACER2Q5QJU3 275 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 C10orf62Q5T681 223 aaPredicted RBP8.09□□□□□ -1.11
SMG6-216ENST00000575176 MFSD4BQ5TF39 518 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 RPUSD3Q6P087 351 aaKnown RBP8.09□□□□□ -1.11
SMG6-216ENST00000575176 TUBA3EQ6PEY2 450 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 COMMD6Q7Z4G1 85 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 CHERPQ8IWX8 916 aaKnown RBP8.09□□□□□ -1.11
SMG6-216ENST00000575176 IQCKQ8N0W5 287 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 RIBC1Q8N443 379 aaPredicted RBP8.09□□□□□ -1.11
SMG6-216ENST00000575176 B3GNT7Q8NFL0 401 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMG6-216ENST00000575176 CPT1CQ8TCG5 803 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 TRPC4APQ8TEL6 797 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 ZNF721Q8TF20 911 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 METTL21AQ8WXB1 218 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 SCMH1Q96GD3 660 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 LPAR4Q99677 370 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 SLC29A3Q9BZD2 475 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 ADAP2Q9NPF8 381 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 PRTFDC1Q9NRG1 225 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 ASF1BQ9NVP2 202 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 OXSMQ9NWU1 459 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 SLC17A7Q9P2U7 560 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 VTI1BQ9UEU0 232 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 ITPR2Q14571 2701 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 ICE1Q9Y2F5 2266 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 ZNF407Q9C0G0 2248 aa8.09□□□□□ -1.12
SMG6-216ENST00000575176 LRBAP50851 2863 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 CSMD2Q7Z408 3487 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 OR5H15A6NDH6 313 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 TCP11X1B4DZS4 312 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 NPIPB8E9PQR5 432 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 MYO1DO94832 1006 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 NADKO95544 446 aaPredicted RBP8.08□□□□□ -1.12
SMG6-216ENST00000575176 ESRRBO95718 433 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 PTX3P26022 381 aaPredicted RBP8.08□□□□□ -1.12
SMG6-216ENST00000575176 TRHRP34981 398 aaPredicted RBP8.08□□□□□ -1.12
SMG6-216ENST00000575176 MLF1P58340 268 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 FOLH1Q04609 750 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 MRPL49Q13405 166 aaKnown RBP8.08□□□□□ -1.12
SMG6-216ENST00000575176 ELAVL1Q15717 326 aaKnown RBP8.08□□□□□ -1.12
SMG6-216ENST00000575176 HIST2H2ACQ16777 129 aaPredicted RBP8.08□□□□□ -1.12
SMG6-216ENST00000575176 PRSS53Q2L4Q9 553 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 SPRED3Q2MJR0 410 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 LGSNQ5TDP6 509 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 HIST2H2AA3Q6FI13 130 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 LYPD8Q6UX82 237 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 C16orf47Q6ZP98 133 aaPredicted RBP8.08□□□□□ -1.12
SMG6-216ENST00000575176 RNF165Q6ZSG1 346 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 GPRIN3Q6ZVF9 776 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 NUDT13Q86X67 352 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 MYLK4Q86YV6 388 aaPredicted RBP8.08□□□□□ -1.12
SMG6-216ENST00000575176 C9orf40Q8IXQ3 194 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 CDYL2Q8N8U2 506 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 ZNF441Q8N8Z8 693 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 SRFBP1Q8NEF9 429 aaKnown RBP8.08□□□□□ -1.12
SMG6-216ENST00000575176 DNAJB14Q8TBM8 379 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 RDH11Q8TC12 318 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 NCLNQ969V3 563 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 RGMAQ96B86 450 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 FAR2Q96K12 515 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 FCRL1Q96LA6 429 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 MECRQ9BV79 373 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 GATA5Q9BWX5 397 aaPredicted RBP8.08□□□□□ -1.12
SMG6-216ENST00000575176 ROGDIQ9GZN7 287 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 TUBB1Q9H4B7 451 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 BRF2Q9HAW0 419 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 SIRT5Q9NXA8 310 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 MAP10Q9P2G4 905 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 DCDC2Q9UHG0 476 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 ADAM29Q9UKF5 820 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 FBXW2Q9UKT8 454 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 EXO1Q9UQ84 846 aaKnown RBP8.08□□□□□ -1.12
SMG6-216ENST00000575176 PLLPQ9Y342 182 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 ANGPTL3Q9Y5C1 460 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 PTGDR2Q9Y5Y4 395 aa8.08□□□□□ -1.12
SMG6-216ENST00000575176 A0A088AWK7 358 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 ASPDHA6ND91 283 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 A8MUA0 341 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 PSMD12O00232 456 aaPredicted RBP8.07□□□□□ -1.12
SMG6-216ENST00000575176 PGRMC2O15173 223 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 SUPT7LO94864 414 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 CBX6O95503 412 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 ENO1P06733 434 aaKnown RBP8.07□□□□□ -1.12
SMG6-216ENST00000575176 FREM3P0C091 2139 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 CT62P0C5K7 136 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 FAM58BPP0C7Q3 252 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 DHRS4L1P0CG22 281 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 NR2F6P10588 404 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 S1PR1P21453 382 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 ZNF10P21506 573 aaPredicted RBP8.07□□□□□ -1.12
SMG6-216ENST00000575176 GNLYP22749 145 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 MST1P26927 711 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 HPDP32754 393 aaPredicted RBP8.07□□□□□ -1.12
SMG6-216ENST00000575176 CD96P40200 585 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 STT3AP46977 705 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 NAGLUP54802 743 aa8.07□□□□□ -1.12
SMG6-216ENST00000575176 PKNOX1P55347 436 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms