RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 C1orf50Q9BV19 199 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 AKTIPQ9H8T0 292 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 CPNE5Q9HCH3 593 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 TEX10Q9NXF1 929 aaPredicted RBP13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 PSME2Q9UL46 239 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 DLGAP4Q9Y2H0 992 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 ANKRD11Q6UB99 2663 aaPredicted RBP13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 GLOD5A6NK44 160 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 SDHDO14521 159 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 PCDH17O14917 1159 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 POLR3GO15318 223 aaPredicted RBP13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 EDF1O60869 148 aaKnown RBP13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 LDB3O75112 727 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 PRKRAO75569 313 aaKnown RBP13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 IL3P08700 152 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 ACPPP15309 386 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 MAOAP21397 527 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 PIK3R1P27986 724 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 CXADRP78310 365 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 RHAGQ02094 409 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 ACTN3Q08043 901 aaPredicted RBP13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 CDC20Q12834 499 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 CRTC2Q53ET0 693 aaPredicted RBP13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 ATP1A1-AS1Q5TC04 95 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 IL23RQ5VWK5 629 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 OR52E8Q6IFG1 317 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 ACAD11Q709F0 780 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 MED25Q71SY5 747 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 PARP9Q8IXQ6 854 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 TMEM52Q8NDY8 209 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 C7orf57Q8NEG2 295 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 THAP4Q8WY91 577 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 TSLPQ969D9 159 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 NACC2Q96BF6 587 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 TSSK3Q96PN8 268 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 CCDC134Q9H6E4 229 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 WDR55Q9H6Y2 383 aaPredicted RBP13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 MIEF1Q9NQG6 463 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 POLHQ9Y253 713 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 SSUH2Q9Y2M2 353 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 WBP11Q9Y2W2 641 aaKnown RBP13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 PCDHA9Q9Y5H5 950 aa13.64□□□□□ -0.23
NPLOC4-218ENST00000574964 SYNDIG1LA6NDD5 238 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 SRRM3A6NNA2 597 aaPredicted RBP13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 ERAL1O75616 437 aaKnown RBP13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 TGDSO95455 350 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 IFNA16P05015 189 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 TROVE2P10155 538 aaKnown RBP eCLIP13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 PRPS2P11908 318 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 DRD2P14416 443 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 TNNI3P19429 210 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 EPHA3P29320 983 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 ASMTP46597 345 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 AQP5P55064 265 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 OR4D2P58180 307 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 ERVK-8P63133 956 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 ID2Q02363 134 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 EMX2Q04743 252 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 EEF1A2Q05639 463 aaKnown RBP13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 SERTAD2Q14140 314 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 ST3GAL2Q16842 350 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 SMU1Q2TAY7 513 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 RIPOR1Q6ZS17 1223 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 LANCL3Q6ZV70 420 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 PPP1R32Q7Z5V6 425 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 MRGPREQ86SM8 312 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 OR4N5Q8IXE1 308 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 LIX1Q8N485 282 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 C8orf44Q96CB5 159 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 C11orf24Q96F05 449 aaPredicted RBP13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 THOC1Q96FV9 657 aaKnown RBP13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 ALOXE3Q9BYJ1 711 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 TRIM55Q9BYV6 548 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 MYNNQ9NPC7 610 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 NECTIN3Q9NQS3 549 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 PNO1Q9NRX1 252 aaKnown RBP13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 FGFR1OP2Q9NVK5 253 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 P4HTMQ9NXG6 502 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 NOP53Q9NZM5 478 aaKnown RBP13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 BAIAP2L1Q9UHR4 511 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 MAN2B2Q9Y2E5 1009 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 HS3ST3B1Q9Y662 390 aa13.63□□□□□ -0.23
NPLOC4-218ENST00000574964 A8MUA0 341 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 K7ENP7 123 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 PGRMC2O15173 223 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 GPR75O95800 540 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 BCKDHAP12694 445 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 SDC1P18827 310 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 TACR1P25103 407 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 GYS2P54840 703 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 FOLH1Q04609 750 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 BIKQ13323 160 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 ATP1A4Q13733 1029 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 RPS6KA2Q15349 733 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 DEFB109BQ30KR1 87 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 SLC9B1Q4ZJI4 515 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 SFT2D3Q587I9 215 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 INO80CQ6PI98 192 aaPredicted RBP13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 TMEM205Q6UW68 189 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 EPGNQ6UW88 154 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms