RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 MNAT1P51948 309 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 NUDT6P53370 316 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 GPX6P59796 221 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 CDK16Q00536 496 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 IFFO1Q0D2I5 559 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 ILF2Q12905 390 aaKnown RBP4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 STX5Q13190 355 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 STX3Q13277 289 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 PMS2P3Q13401 168 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 GCKRQ14397 625 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 MESDQ14696 234 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 PSG3Q16557 428 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 RBBP7Q16576 425 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 MICBQ29980 383 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 C6orf183Q5T699 404 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 THOC7Q6I9Y2 204 aaKnown RBP4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 FAM166AQ6J272 317 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 CES5AQ6NT32 575 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 H3F3CQ6NXT2 135 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 NLRX1Q86UT6 975 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 DTX2Q86UW9 622 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 XYLT1Q86Y38 959 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 PCDH20Q8N6Y1 951 aaKnown RBP4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 COLGALT1Q8NBJ5 622 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 OR4N2Q8NGD1 307 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 OR51L1Q8NGJ5 315 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 OR10Q1Q8NGQ4 319 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 OR1J2Q8NGS2 313 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 OR2AJ1Q8NGZ0 328 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 UBTD2Q8WUN7 234 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 FAR1Q8WVX9 515 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 PROX1Q92786 737 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 SNAPC3Q92966 411 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 RNF183Q96D59 192 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 TM4SF19Q96DZ7 209 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 MED30Q96HR3 178 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 PPP1R16AQ96I34 528 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 VSTM2LQ96N03 204 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 ZNF570Q96NI8 536 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 TSSK2Q96PF2 358 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 CMKLR1Q99788 373 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 TMEM246Q9BRR3 403 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 HINT2Q9BX68 163 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 DGCR6LQ9BY27 220 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 GSDMCQ9BYG8 508 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 TRIM9Q9C026 710 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 DRC3Q9H069 523 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 ACTL8Q9H568 366 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 SLITRK6Q9H5Y7 841 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 TXNRD2Q9NNW7 524 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 IL23AQ9NPF7 189 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 DYRK4Q9NR20 520 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 PXMP2Q9NR77 195 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 UFSP2Q9NUQ7 469 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 SMOXQ9NWM0 555 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 DLL3Q9NYJ7 618 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 PSMC3IPQ9P2W1 217 aaPredicted RBP4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 PITPNC1Q9UKF7 332 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 ADAM21Q9UKJ8 722 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 WDR45Q9Y484 360 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 A3GALT2U3KPV4 340 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 SPATA31A6Q5VVP1 1343 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 EMSYQ7Z589 1322 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 ATXN2Q99700 1313 aaKnown RBP4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 A0A0A6YYH2 397 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 A0A1B0GVL5 298 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 RNF222A6NCQ9 220 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 TMEM202A6NGA9 273 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 FBLL1A6NHQ2 334 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 A6NJ64 397 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 GOLGA8JA6NMD2 632 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 PRSS46E5RG02 174 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 E7ESA3 106 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 C1QTNF3-AMACRE9PGA6 284 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 NPIPB6E9PJ23 425 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 M0R296 226 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 TOR1AO14656 332 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 HAT1O14929 419 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 NBR2O15453 112 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 CYP26A1O43174 497 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 OR10H2O60403 315 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 ATP2C2O75185 946 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 RNF8O76064 485 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 FARP2O94887 1054 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 NSA2O95478 260 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 GSRP00390 522 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 GOT2P00505 430 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 CST1P01037 141 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 IGHV2-70P01814 119 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 C8BP07358 591 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 ADH4P08319 380 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 CD63P08962 238 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 RFPL3SP0C7P2 107 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 GIFP27352 417 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 RPL21P46778 160 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 CDC34P49427 236 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 TNFSF10P50591 281 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 MMP15P51511 669 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 CHN2P52757 468 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms