RNA–Protein interactions for RNA: ENST00000571456.1

VPS53-210, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-210ENST00000571456 RTCAO00442 366 aaKnown RBP19.37■□□□□ 0.69
VPS53-210ENST00000571456 SH3BGRLO75368 114 aa19.37■□□□□ 0.69
VPS53-210ENST00000571456 PCSK2P16519 638 aa19.37■□□□□ 0.69
VPS53-210ENST00000571456 SERPINB3P29508 390 aa19.37■□□□□ 0.69
VPS53-210ENST00000571456 ARRB2P32121 409 aa19.37■□□□□ 0.69
VPS53-210ENST00000571456 SNRPNP63162 240 aaKnown RBP19.37■□□□□ 0.69
VPS53-210ENST00000571456 CDC20Q12834 499 aa19.37■□□□□ 0.69
VPS53-210ENST00000571456 RUNX2Q13950 521 aa19.37■□□□□ 0.69
VPS53-210ENST00000571456 SYT16Q17RD7 645 aa19.37■□□□□ 0.69
VPS53-210ENST00000571456 CCNYL2Q5T2Q4 361 aa19.37■□□□□ 0.69
VPS53-210ENST00000571456 MRM1Q6IN84 353 aaKnown RBP19.37■□□□□ 0.69
VPS53-210ENST00000571456 ADAMTS17Q8TE56 1095 aa19.37■□□□□ 0.69
VPS53-210ENST00000571456 PPP3R2Q96LZ3 170 aa19.37■□□□□ 0.69
VPS53-210ENST00000571456 SORT1Q99523 831 aa19.37■□□□□ 0.69
VPS53-210ENST00000571456 MRPL1Q9BYD6 325 aaKnown RBP19.37■□□□□ 0.69
VPS53-210ENST00000571456 SOX17Q9H6I2 414 aaPredicted RBP19.37■□□□□ 0.69
VPS53-210ENST00000571456 LANCL2Q9NS86 450 aa19.37■□□□□ 0.69
VPS53-210ENST00000571456 KCMF1Q9P0J7 381 aa19.37■□□□□ 0.69
VPS53-210ENST00000571456 VTI1BQ9UEU0 232 aa19.37■□□□□ 0.69
VPS53-210ENST00000571456 MKL2Q9ULH7 1088 aa19.37■□□□□ 0.69
VPS53-210ENST00000571456 POLHQ9Y253 713 aa19.37■□□□□ 0.69
VPS53-210ENST00000571456 PEX12O00623 359 aa19.36■□□□□ 0.69
VPS53-210ENST00000571456 ITM2AO43736 263 aa19.36■□□□□ 0.69
VPS53-210ENST00000571456 LYPLA1O75608 230 aaPredicted RBP19.36■□□□□ 0.69
VPS53-210ENST00000571456 UMODP07911 640 aa19.36■□□□□ 0.69
VPS53-210ENST00000571456 FAM58BPP0C7Q3 252 aa19.36■□□□□ 0.69
VPS53-210ENST00000571456 ACPPP15309 386 aa19.36■□□□□ 0.69
VPS53-210ENST00000571456 RPS18P62269 152 aaKnown RBP19.36■□□□□ 0.69
VPS53-210ENST00000571456 OLR1P78380 273 aa19.36■□□□□ 0.69
VPS53-210ENST00000571456 OCRLQ01968 901 aa19.36■□□□□ 0.69
VPS53-210ENST00000571456 SMU1Q2TAY7 513 aa19.36■□□□□ 0.69
VPS53-210ENST00000571456 MINDY4Q4G0A6 757 aa19.36■□□□□ 0.69
VPS53-210ENST00000571456 SPDYAQ5MJ70 313 aa19.36■□□□□ 0.69
VPS53-210ENST00000571456 RGS9BPQ6ZS82 235 aa19.36■□□□□ 0.69
VPS53-210ENST00000571456 PARP9Q8IXQ6 854 aa19.36■□□□□ 0.69
VPS53-210ENST00000571456 DDIASQ8IXT1 998 aa19.36■□□□□ 0.69
VPS53-210ENST00000571456 C1orf52Q8N6N3 182 aaKnown RBP19.36■□□□□ 0.69
VPS53-210ENST00000571456 ZNF781Q8N8C0 355 aa19.36■□□□□ 0.69
VPS53-210ENST00000571456 C11orf24Q96F05 449 aaPredicted RBP19.36■□□□□ 0.69
VPS53-210ENST00000571456 MAGEB18Q96M61 343 aa19.36■□□□□ 0.69
VPS53-210ENST00000571456 C7orf26Q96N11 449 aa19.36■□□□□ 0.69
VPS53-210ENST00000571456 HBEGFQ99075 208 aa19.36■□□□□ 0.69
VPS53-210ENST00000571456 C1orf109Q9NX04 203 aa19.36■□□□□ 0.69
VPS53-210ENST00000571456 FIS1Q9Y3D6 152 aa19.36■□□□□ 0.69
VPS53-210ENST00000571456 MRPS18BQ9Y676 258 aaKnown RBP19.36■□□□□ 0.69
VPS53-210ENST00000571456 CYR61O00622 381 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 PRMT3O60678 531 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 ALOX12BO75342 701 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 VPS4BO75351 444 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 B3GALT4O96024 378 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 C8orf89P0DMQ9 161 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 CPN2P22792 545 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 MAPK1P28482 360 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 TPP2P29144 1249 aaPredicted RBP19.35■□□□□ 0.69
VPS53-210ENST00000571456 MAPK12P53778 367 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 RRADP55042 308 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 AP2B1P63010 937 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 HMGCS1Q01581 520 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 TNFRSF17Q02223 184 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 MAD2L1Q13257 205 aaPredicted RBP19.35■□□□□ 0.69
VPS53-210ENST00000571456 ERV3-1Q14264 604 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 XKR7Q5GH72 579 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 MFSD4BQ5TF39 518 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 CES4AQ5XG92 561 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 TMEM205Q6UW68 189 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 TMEM102Q8N9M5 508 aaPredicted RBP19.35■□□□□ 0.69
VPS53-210ENST00000571456 CKAP2Q8WWK9 683 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 TANKQ92844 425 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 FER1L6-AS2Q96M78 137 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 FAIM2Q9BWQ8 316 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 VN1R1Q9GZP7 353 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 CCL27Q9Y4X3 112 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 HIVEP3Q5T1R4 2406 aa19.35■□□□□ 0.69
VPS53-210ENST00000571456 SETD2Q9BYW2 2564 aaPredicted RBP19.35■□□□□ 0.69
VPS53-210ENST00000571456 LOC102723996A0A087X1L8 192 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 CDC14CA4D256 554 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 TRPC5OSA6NMA1 111 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 PIP5K1BO14986 540 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 PROM1O43490 865 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 CTNSO60931 367 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 EEDO75530 441 aaKnown RBP19.34■□□□□ 0.69
VPS53-210ENST00000571456 KLK1P06870 262 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 TIA1P31483 386 aaKnown RBP eCLIP19.34■□□□□ 0.69
VPS53-210ENST00000571456 RHAGQ02094 409 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 IL10RAQ13651 578 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 Q6ZSR9 355 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 MRGPREQ86SM8 312 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 CRLF3Q8IUI8 442 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 EFCAB3Q8N7B9 438 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 PIWIL2Q8TC59 973 aaKnown RBP19.34■□□□□ 0.69
VPS53-210ENST00000571456 AGR3Q8TD06 166 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 C19orf60Q96EN9 201 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 MAPKAP1Q9BPZ7 522 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 C20orf27Q9GZN8 174 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 TUBB1Q9H4B7 451 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 LRTM1Q9HBL6 345 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 PRTFDC1Q9NRG1 225 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 ASB4Q9Y574 426 aa19.34■□□□□ 0.69
VPS53-210ENST00000571456 GNG14A0A1W2PPG7 69 aa19.33■□□□□ 0.68
VPS53-210ENST00000571456 C1orf226A1L170 272 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms