RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 PRCCQ92733 491 aaPredicted RBP3.75□□□□□ -1.81
NUP88-202ENST00000570937 LINGO1Q96FE5 620 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 EGLN2Q96KS0 407 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 CCDC114Q96M63 670 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 CCDC42Q96M95 316 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 CFAP57Q96MR6 1250 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 ZNF583Q96ND8 569 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 DUX3Q96PT4 197 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 PCDHB18PQ96TA0 734 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 C11orf70Q9BRQ4 267 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 CNPY3Q9BT09 278 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 XPO4Q9C0E2 1151 aaKnown RBP3.75□□□□□ -1.81
NUP88-202ENST00000570937 RAB6CQ9H0N0 254 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 PIGMQ9H3S5 423 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 PIGVQ9NUD9 493 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 ABCB8Q9NUT2 735 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 FAM118AQ9NWS6 357 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 ARHGEF38Q9NXL2 777 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 THAP10Q9P2Z0 257 aaPredicted RBP3.75□□□□□ -1.81
NUP88-202ENST00000570937 OR12D3Q9UGF7 316 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 VPS28Q9UK41 221 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 VANGL2Q9ULK5 521 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 SCML1Q9UN30 329 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 GAB2Q9UQC2 676 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 NCKAP1Q9Y2A7 1128 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 PCDHGA5Q9Y5G8 931 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 DENND4CQ5VZ89 1909 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 OBSL1O75147 1896 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 VPS13AQ96RL7 3174 aa3.75□□□□□ -1.81
NUP88-202ENST00000570937 MIA3Q5JRA6 1907 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 ANAPC1Q9H1A4 1944 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 EDDM13A0A1B0GTR0 161 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 ILVBLA1L0T0 632 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 EIF4E1BA6NMX2 242 aaKnown RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 E9PAM4 449 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 DVL1O14640 695 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 MAP2K7O14733 419 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 BUD23O43709 281 aaKnown RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 PRPSAP2O60256 369 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 PRKNO60260 465 aaPredicted RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 GAS8-AS1O95177 125 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 ADCY5O95622 1261 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 PAK4O96013 591 aaPredicted RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 DNTTP04053 509 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 RHOCP08134 193 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 PLEKP08567 350 aaPredicted RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 CFC1BP0CG36 223 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 CFC1P0CG37 223 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 SKILP12757 684 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 GNSP15586 552 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 NR1D1P20393 614 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 PSMA2P25787 234 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 HOXC13P31276 330 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 HNRNPH3P31942 346 aaKnown RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 CASP14P31944 242 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 CD70P32970 193 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 CSKP41240 450 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 CRIP2P52943 208 aaPredicted RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 PLK1P53350 603 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 DVL1P1P54792 670 aaPredicted RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 LINC01547P58512 204 aaPredicted RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 MAMLD1Q13495 774 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 ENPP2Q13822 863 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 PDE1CQ14123 709 aaPredicted RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 PIGHQ14442 188 aaPredicted RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 SPA17Q15506 151 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 CCDC14Q49A88 953 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 TTC31Q49AM3 519 aaPredicted RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 BOLA3Q53S33 107 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 C2CD6Q53TS8 623 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 CCDC122Q5T0U0 273 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 LRIF1Q5T3J3 769 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 FAM46CQ5VWP2 391 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 CCDC70Q6NSX1 233 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 ADAM5Q6NVV9 412 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 RWDD4Q6NW29 188 aaKnown RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 SCYL2Q6P3W7 929 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 ALKBH5Q6P6C2 394 aaKnown RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 WDR59Q6PJI9 974 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 SARM1Q6SZW1 724 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 RAD9BQ6WBX8 426 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 ZNF571Q7Z3V5 609 aaPredicted RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 PXKQ7Z7A4 578 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 CPLX4Q7Z7G2 160 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 PHLDB2Q86SQ0 1253 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 SDCCAG8Q86SQ7 713 aaPredicted RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 FAM131BQ86XD5 332 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 PSTKQ8IV42 348 aaKnown RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 KLHDC8BQ8IXV7 354 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 KMT2EQ8IZD2 1858 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 EMC1Q8N766 993 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 SUMF1Q8NBK3 374 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 OR2T3Q8NH03 318 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 HM13Q8TCT9 377 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 UTP15Q8TED0 518 aaKnown RBP3.74□□□□□ -1.81
NUP88-202ENST00000570937 TRPC4APQ8TEL6 797 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 GANCQ8TET4 914 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 FAM172AQ8WUF8 416 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 NTAN1Q96AB6 310 aa3.74□□□□□ -1.81
NUP88-202ENST00000570937 ZNF653Q96CK0 615 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms