RNA–Protein interactions for RNA: ENST00000570279.1

CFDP1-210, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-210ENST00000570279 USP22Q9UPT9 525 aa3.96□□□□□ -1.78
CFDP1-210ENST00000570279 RNF6Q9Y252 685 aa3.96□□□□□ -1.78
CFDP1-210ENST00000570279 RUVBL1Q9Y265 456 aaKnown RBP3.96□□□□□ -1.78
CFDP1-210ENST00000570279 WBP11Q9Y2W2 641 aaKnown RBP3.96□□□□□ -1.78
CFDP1-210ENST00000570279 PPIL1Q9Y3C6 166 aa3.96□□□□□ -1.78
CFDP1-210ENST00000570279 TSC22D4Q9Y3Q8 395 aa3.96□□□□□ -1.78
CFDP1-210ENST00000570279 SAMHD1Q9Y3Z3 626 aaKnown RBP3.96□□□□□ -1.78
CFDP1-210ENST00000570279 PCDHGB2Q9Y5G2 931 aa3.96□□□□□ -1.78
CFDP1-210ENST00000570279 ZFP37Q9Y6Q3 630 aaPredicted RBP3.96□□□□□ -1.78
CFDP1-210ENST00000570279 DGKBQ9Y6T7 804 aa3.96□□□□□ -1.78
CFDP1-210ENST00000570279 ANK1P16157 1881 aa3.96□□□□□ -1.78
CFDP1-210ENST00000570279 PTPRFP10586 1907 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 MYH9P35579 1960 aaKnown RBP3.95□□□□□ -1.78
CFDP1-210ENST00000570279 FNDC1Q4ZHG4 1894 aaPredicted RBP3.95□□□□□ -1.78
CFDP1-210ENST00000570279 IGLV3-16A0A075B6K0 115 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 A0A0D9SEW6 157 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 A0A0G2JNJ9 132 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 GLYATL1P3A0A0U1RQE8 302 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 ZNF840PA6NDX5 716 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 GLTPD2A6NH11 291 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 H0YIV9 168 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 TMX2-CTNND1H3BSU7 103 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 GFYI3L273 518 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 RNASET2O00584 256 aaKnown RBP3.95□□□□□ -1.78
CFDP1-210ENST00000570279 ZNF197O14709 1029 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 FPGTO14772 594 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 GPR42O15529 346 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 SEPT4O43236 478 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 XPNPEP2O43895 674 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 SCN2BO60939 215 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 WBP4O75554 376 aaKnown RBP3.95□□□□□ -1.78
CFDP1-210ENST00000570279 UGT2B17O75795 530 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 PARNO95453 639 aaKnown RBP3.95□□□□□ -1.78
CFDP1-210ENST00000570279 OXSR1O95747 527 aaPredicted RBP3.95□□□□□ -1.78
CFDP1-210ENST00000570279 ZNF682O95780 498 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 LGI1O95970 557 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 TRBC1P01850 177 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 ITGB1P05556 798 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 PIRTP0C851 137 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 CYBAP13498 195 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 JUPP14923 745 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 ENGP17813 658 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 SDC1P18827 310 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 CYP2A7P20853 494 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 CD72P21854 359 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 PRKACGP22612 351 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 APEX1P27695 318 aaKnown RBP3.95□□□□□ -1.78
CFDP1-210ENST00000570279 SERPINA4P29622 427 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 HLA-FP30511 346 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 HOXA9P31269 272 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 SLC6A4P31645 630 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 RPS5P46782 204 aaKnown RBP3.95□□□□□ -1.78
CFDP1-210ENST00000570279 RGRP47804 291 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 OR1G1P47890 313 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 SLC6A12P48065 614 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 MASP1P48740 699 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 HSPA7P48741 367 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 RGS6P49758 472 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 NEK2P51955 445 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 LIMK1P53667 647 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 IST1P53990 364 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 UGT2B15P54855 530 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 SMIM11AP58511 58 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 KRTAP10-2P60368 255 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 CDC42P60953 191 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 VBP1P61758 197 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 SELENOWP63302 87 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 IFITM3Q01628 133 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 RHAGQ02094 409 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 BCL2L1Q07817 233 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 FCHO2Q0JRZ9 810 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 SELENBP1Q13228 472 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 GTF2H3Q13889 308 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 SIM2Q14190 667 aaPredicted RBP3.95□□□□□ -1.78
CFDP1-210ENST00000570279 E2F2Q14209 437 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 IRF3Q14653 427 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 PTPRCAPQ14761 206 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 STARD3Q14849 445 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 KCNJ8Q15842 424 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 CDKN3Q16667 212 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 TIGD6Q17RP2 521 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 ZNF630Q2M218 657 aaPredicted RBP3.95□□□□□ -1.78
CFDP1-210ENST00000570279 TRIM71Q2Q1W2 868 aaKnown RBP3.95□□□□□ -1.78
CFDP1-210ENST00000570279 INAVAQ3KP66 663 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 IQCCQ4KMZ1 466 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 SPIN4Q56A73 249 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 CARD16Q5EG05 197 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 ZMAT1Q5H9K5 638 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 SLC25A30Q5SVS4 291 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 PRAMEF19Q5SWL8 479 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 TPRG1LQ5T0D9 272 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 AGAP6Q5VW22 663 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 RNF219Q5W0B1 726 aaPredicted RBP3.95□□□□□ -1.78
CFDP1-210ENST00000570279 FRG2Q64ET8 278 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 TPGS2Q68CL5 300 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 TMEM200BQ69YZ2 307 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 SLC8B1Q6J4K2 584 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 CXorf57Q6NSI4 855 aaKnown RBP3.95□□□□□ -1.78
CFDP1-210ENST00000570279 KIAA1841Q6NSI8 718 aa3.95□□□□□ -1.78
CFDP1-210ENST00000570279 NOXRED1Q6NXP6 359 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms