RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 FCGR2BP31994 310 aaPredicted RBP4.3□□□□□ -1.72
CHD9-220ENST00000569794 BMI1P35226 326 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 SYKP43405 635 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 OR3A1P47881 315 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 SLC1A6P48664 564 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 NR2C2P49116 596 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 PITX1P78337 314 aaPredicted RBP4.3□□□□□ -1.72
CHD9-220ENST00000569794 CBX1P83916 185 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 MYBPC1Q00872 1141 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 VEZF1Q14119 521 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 PTGISQ16647 500 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 ADPRMQ3LIE5 342 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 LRIT3Q3SXY7 679 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 LCE3AQ5TA76 89 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 AGAP6Q5VW22 663 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 IL23RQ5VWK5 629 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 ANKRD54Q6NXT1 300 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 CCNI2Q6ZMN8 369 aaPredicted RBP4.3□□□□□ -1.72
CHD9-220ENST00000569794 SLC16A9Q7RTY1 509 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 TMPRSS11BQ86T26 416 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 FAM114A1Q8IWE2 563 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 GCNT2Q8N0V5 402 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 LYG1Q8N1E2 194 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 SMYD1Q8NB12 490 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 HAS2Q92819 552 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 ITFG2Q969R8 447 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 LRRC39Q96DD0 335 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 NRBF2Q96F24 287 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 PGM2Q96G03 612 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 ZNF599Q96NL3 588 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 GFI1Q99684 422 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 CITED1Q99966 193 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 GAL3ST1Q99999 423 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 CDK19Q9BWU1 502 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 SLC2A11Q9BYW1 496 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 CSTL1Q9H114 145 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 HHATLQ9HCP6 504 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 GPR173Q9NS66 373 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 EXOC1Q9NV70 894 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 UBAP1Q9NZ09 502 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 VPS54Q9P1Q0 977 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 COMMD3-BMI1R4GMX3 469 aa4.3□□□□□ -1.72
CHD9-220ENST00000569794 PRSS51A0A1B0GVH4 220 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 ACOD1A6NK06 481 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 SPECC1L-ADORA2AF8WAN1 911 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 EEF2KO00418 725 aaKnown RBP4.29□□□□□ -1.72
CHD9-220ENST00000569794 SNNO75324 88 aaPredicted RBP4.29□□□□□ -1.72
CHD9-220ENST00000569794 NDUFB4O95168 129 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 MBD3O95983 291 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 CSF2P04141 144 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 CCDC172P0C7W6 258 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 GCFC2P16383 781 aaKnown RBP4.29□□□□□ -1.72
CHD9-220ENST00000569794 ZNF10P21506 573 aaPredicted RBP4.29□□□□□ -1.72
CHD9-220ENST00000569794 PRDX2P32119 198 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 OR1D2P34982 312 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 RFC2P35250 354 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 NUMBP49757 651 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 RGS4P49798 205 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 CSNK2A1P68400 391 aaPredicted RBP4.29□□□□□ -1.72
CHD9-220ENST00000569794 CNTN2Q02246 1040 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 MBTD1Q05BQ5 628 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 ILF2Q12905 390 aaKnown RBP4.29□□□□□ -1.72
CHD9-220ENST00000569794 TRDNQ13061 729 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 CUL1Q13616 776 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 BTG3Q14201 252 aaPredicted RBP4.29□□□□□ -1.72
CHD9-220ENST00000569794 DECR1Q16698 335 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 ANKRD55Q3KP44 614 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 ZNF876PQ49A33 203 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 PPP6R3Q5H9R7 873 aaPredicted RBP4.29□□□□□ -1.72
CHD9-220ENST00000569794 IRAK1BP1Q5VVH5 260 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 TAF3Q5VWG9 929 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 FAM166AQ6J272 317 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 ZNF534Q76KX8 674 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 CENPQQ7L2Z9 268 aaPredicted RBP4.29□□□□□ -1.72
CHD9-220ENST00000569794 DSELQ8IZU8 1212 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 SLC43A2Q8N370 569 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 LRRC17Q8N6Y2 441 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 ADAD2Q8NCV1 583 aaKnown RBP4.29□□□□□ -1.72
CHD9-220ENST00000569794 ZNF248Q8NDW4 579 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 CSNK2A3Q8NEV1 391 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 OR5M8Q8NGP6 311 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 PNPT1Q8TCS8 783 aaKnown RBP4.29□□□□□ -1.72
CHD9-220ENST00000569794 SLC26A7Q8TE54 656 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 SSMEM1Q8WWF3 244 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 MTERF3Q96E29 417 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 C19orf60Q96EN9 201 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 THOC1Q96FV9 657 aaKnown RBP4.29□□□□□ -1.72
CHD9-220ENST00000569794 SLC41A3Q96GZ6 507 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 GRAMD2BQ96HH9 432 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 FAM210AQ96ND0 272 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 LMF2Q9BU23 707 aaKnown RBP4.29□□□□□ -1.72
CHD9-220ENST00000569794 NUP58Q9BVL2 599 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 IQCGQ9H095 443 aaKnown RBP4.29□□□□□ -1.72
CHD9-220ENST00000569794 ESRP2Q9H6T0 727 aaKnown RBP4.29□□□□□ -1.72
CHD9-220ENST00000569794 SYNDIG1Q9H7V2 258 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 COG4Q9H9E3 785 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 FN3KRPQ9HA64 309 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 PLCL2Q9UPR0 1127 aa4.29□□□□□ -1.72
CHD9-220ENST00000569794 DISP3Q9P2K9 1392 aa4.28□□□□□ -1.72
CHD9-220ENST00000569794 HEG1Q9ULI3 1381 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms