RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 LRRC39Q96DD0 335 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 KCNC2Q96PR1 638 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 CNOT10Q9H9A5 744 aaKnown RBP14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 ACKR4Q9NPB9 350 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 TUBA8Q9NY65 449 aaPredicted RBP14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 JRKLQ9Y4A0 524 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 DNAJC13O75165 2243 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 G3V3Y1 287 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 CDC7O00311 574 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 DNALI1O14645 258 aaPredicted RBP14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 PROM1O43490 865 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 CCL3P10147 92 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 CERS1P27544 350 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 DNASE1L1P49184 302 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 ASCL1P50553 236 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 FRG1Q14331 258 aaKnown RBP14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 DAZAP2Q15038 168 aaPredicted RBP14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 SF3B4Q15427 424 aaKnown RBP eCLIP14.54□□□□□ -0.082e-9■□□□□ 10.8
HERPUD1-215ENST00000568676 PIGGQ5H8A4 983 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 CDKL4Q5MAI5 379 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 CDC20BQ86Y33 519 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 MMP21Q8N119 569 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 PDIK1LQ8N165 341 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 PAQR8Q8TEZ7 354 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 RHBDF1Q96CC6 855 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 VPS39Q96JC1 886 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 ART5Q96L15 291 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 CSF3RQ99062 836 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 EFCAB11Q9BUY7 163 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 ZNF703Q9H7S9 590 aaPredicted RBP14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 POPDC3Q9HBV1 291 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 ZFP64Q9NPA5 681 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 ALKBH4Q9NXW9 302 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 CRIM1Q9NZV1 1036 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 CNIH4Q9P003 139 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 CTNNAL1Q9UBT7 734 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 ZNF629Q9UEG4 869 aaPredicted RBP14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 MTRF1LQ9UGC7 380 aaKnown RBP14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 IKZF3Q9UKT9 509 aa14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 PRRC2AP48634 2157 aaKnown RBP14.54□□□□□ -0.08
HERPUD1-215ENST00000568676 ZNF469Q96JG9 3925 aaPredicted RBP14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 NPEPPSL1A6NEC2 478 aa14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 AHRRA9YTQ3 701 aa14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 CLGNO14967 610 aa14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 CELA3AP09093 270 aa14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 UQCRC1P31930 480 aa14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 GGT5P36269 586 aa14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 LAPTM5Q13571 262 aa14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 ZNF791Q3KP31 576 aaPredicted RBP14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 PAGE2BQ5JRK9 111 aa14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 PAMR1Q6UXH9 720 aa14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 MAATS1Q7Z4T9 603 aa14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 BIVMQ86UB2 503 aa14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 ULK2Q8IYT8 1036 aa14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 LRRC25Q8N386 305 aaPredicted RBP14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 RNASE6Q93091 150 aaKnown RBP14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 PTCD3Q96EY7 689 aaKnown RBP14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 TBCDQ9BTW9 1192 aa14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 SH2D2AQ9NP31 389 aa14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 PRDM7Q9NQW5 492 aa14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 ASIC3Q9UHC3 531 aa14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 PLEKHA6Q9Y2H5 1048 aa14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 RPH3AQ9Y2J0 694 aaPredicted RBP14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 NIPBLQ6KC79 2804 aaeCLIP14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 NAV3Q8IVL0 2385 aa14.53□□□□□ -0.08
HERPUD1-215ENST00000568676 ANKHD1Q8IWZ3 2542 aaKnown RBP14.52□□□□□ -0.08
HERPUD1-215ENST00000568676 ABCA4P78363 2273 aa14.52□□□□□ -0.08
HERPUD1-215ENST00000568676 TBX6O95947 436 aaPredicted RBP14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 RAF1P04049 648 aa14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 ENDOUP21128 410 aaKnown RBP14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 TIMP3P35625 211 aa14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 KCNJ2P63252 427 aa14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 ADAM8P78325 824 aa14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 TGFBIQ15582 683 aa14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 HIST2H2ACQ16777 129 aaPredicted RBP14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 MSS51Q4VC12 460 aa14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 TBCELQ5QJ74 424 aa14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 STEAP4Q687X5 459 aa14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 HIST2H2AA3Q6FI13 130 aa14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 KIF18BQ86Y91 864 aa14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 LIX1Q8N485 282 aa14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 NEIL3Q8TAT5 605 aa14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 ACTRT1Q8TDG2 376 aa14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 ZNF721Q8TF20 911 aa14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 SPACA9Q96E40 222 aaPredicted RBP14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 WDR34Q96EX3 536 aa14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 MS4A14Q96JA4 679 aa14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 LIME1Q9H400 295 aa14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 DNAJC11Q9NVH1 559 aa14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 NSMCE4AQ9NXX6 385 aa14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 SPRR3Q9UBC9 169 aa14.52□□□□□ -0.09
HERPUD1-215ENST00000568676 FAM95CA0A1B0GW59 222 aa14.51□□□□□ -0.09
HERPUD1-215ENST00000568676 LDB3O75112 727 aa14.51□□□□□ -0.09
HERPUD1-215ENST00000568676 SCELO95171 688 aa14.51□□□□□ -0.09
HERPUD1-215ENST00000568676 EPPINO95925 133 aa14.51□□□□□ -0.09
HERPUD1-215ENST00000568676 SERPINB3P29508 390 aa14.51□□□□□ -0.09
HERPUD1-215ENST00000568676 CEACAM8P31997 349 aaPredicted RBP14.51□□□□□ -0.09
HERPUD1-215ENST00000568676 GDF5P43026 501 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms