RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	TEX10	Q9NXF1	929 aa	Predicted RBP	11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	PSME2	Q9UL46	239 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	TCFL5	Q9UL49	500 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	ATG4B	Q9Y4P1	393 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	PCDHA9	Q9Y5H5	950 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	ASPM	Q8IZT6	3477 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	LOC101059948	A0A1B0GTJ6	334 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626		A0A1W2PR48	441 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	UBD	O15205	165 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	CTNS	O60931	367 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	KLF7	O75840	302 aa	Predicted RBP	11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	HEXB	P07686	556 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	G6PD	P11413	515 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	DDC	P20711	480 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	DRD4	P21917	467 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	TACR1	P25103	407 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	MRPL19	P49406	292 aa	Known RBP	11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	CLNS1A	P54105	237 aa	Known RBP	11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	STX1B	P61266	288 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	SLC13A2	Q13183	592 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	BIK	Q13323	160 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	COL9A2	Q14055	689 aa	Predicted RBP	11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	PTGR1	Q14914	329 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	DPY19L1	Q2PZI1	675 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	VWA2	Q5GFL6	755 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	MFSD4B	Q5TF39	518 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	FAM71E1	Q6IPT2	247 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	UNQ6494/PRO21346	Q6UXR6	183 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	CLNK	Q7Z7G1	428 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	SAMD14	Q8IZD0	417 aa	Predicted RBP	11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	THOC1	Q96FV9	657 aa	Known RBP	11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	RILP	Q96NA2	401 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	TSSK3	Q96PN8	268 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	RBCK1	Q9BYM8	510 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	BRINP2	Q9C0B6	783 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	FAM107B	Q9H098	131 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	KCNK13	Q9HB14	408 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	MIEF1	Q9NQG6	463 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	TMEM45A	Q9NWC5	275 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	C19orf25	Q9UFG5	118 aa	Predicted RBP	11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	FARSA	Q9Y285	508 aa	Known RBP	11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	PTRH2	Q9Y3E5	179 aa	Known RBP	11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	CHD6	Q8TD26	2715 aa		11.3	□□□□□ -0.6
FANCA-231	ENST00000568626	IDS	B3KWA1	339 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626		E9PBE3	544 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	RRP8	O43159	456 aa	Known RBP	11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	TLX3	O43711	291 aa	Predicted RBP	11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	SNX3	O60493	162 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	KLHL41	O60662	606 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	TBX19	O60806	448 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	B4GALT2	O60909	372 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	CNOT3	O75175	753 aa	Known RBP	11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	DNAJB6	O75190	326 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	CDC123	O75794	336 aa	Predicted RBP	11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	RECK	O95980	971 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	FAM107A	O95990	144 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	ALDOC	P09972	364 aa	Known RBP	11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	ATXN8OS	P0DMR3	200 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	LIF	P15018	202 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	ALDH9A1	P49189	494 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	ATP4B	P51164	291 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	EMP2	P54851	167 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	DIO3	P55073	304 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	CLDN8	P56748	225 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	MC1R	Q01726	317 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	RHAG	Q02094	409 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	ACTN3	Q08043	901 aa	Predicted RBP	11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	C2orf80	Q0P641	193 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	SERTAD2	Q14140	314 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	SQLE	Q14534	574 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	RPS6KA2	Q15349	733 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	TGIF1	Q15583	401 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	PDCD4	Q53EL6	469 aa	Known RBP	11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	C18orf63	Q68DL7	685 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	SLC48A1	Q6P1K1	146 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	RAB43	Q86YS6	212 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	SCUBE1	Q8IWY4	988 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	NATD1	Q8N6N6	113 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	GLB1L3	Q8NCI6	653 aa	Predicted RBP	11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	PLPP5	Q8NEB5	264 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	C10orf82	Q8WW14	230 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	METTL21A	Q8WXB1	218 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	IP6K3	Q96PC2	410 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	ZBTB18	Q99592	522 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	PRPF18	Q99633	342 aa	Known RBP	11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	PELO	Q9BRX2	385 aa	Known RBP	11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	DPY30	Q9C005	99 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	VN1R1	Q9GZP7	353 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	ACTL8	Q9H568	366 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	RABEP2	Q9H5N1	569 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	REEP4	Q9H6H4	257 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	SOX17	Q9H6I2	414 aa	Predicted RBP	11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	SDR39U1	Q9NRG7	319 aa	Predicted RBP	11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	GIMAP4	Q9NUV9	329 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	ATAD3A	Q9NVI7	634 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	TAS2R7	Q9NYW3	318 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	ZIM2	Q9NZV7	527 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	C3orf18	Q9UK00	162 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	MKL2	Q9ULH7	1088 aa		11.29	□□□□□ -0.6
FANCA-231	ENST00000568626	ENTPD4	Q9Y227	616 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms