RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 COPS7AQ9UBW8 275 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 SLC22A14Q9Y267 594 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 ATRQ13535 2644 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 KIAA1324LA8MWY0 1029 aaPredicted RBP10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 AHRRA9YTQ3 701 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 C17orf105B2RV13 164 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 GOLGA8MH3BSY2 632 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 CYR61O00622 381 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 ARHGEF9O43307 516 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 CTNSO60931 367 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 LY6G6DO95868 133 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 EPPINO95925 133 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 RFPL3SP0C7P2 107 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 TNNI3P19429 210 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 HNRNPH1P31943 449 aaKnown RBP10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 HPDP32754 393 aaPredicted RBP10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 TIMP3P35625 211 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 MAGEA3P43357 314 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 PLA2G16P53816 162 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 LIM2P55344 173 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 STX4Q12846 297 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 SERTAD2Q14140 314 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 RBM20Q5T481 1227 aaKnown RBP10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 TRIM40Q6P9F5 258 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 TMIGD1Q6UXZ0 262 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 TMEM139Q8IV31 216 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 LRRC25Q8N386 305 aaPredicted RBP10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 OR2L5Q8NG80 312 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 SPATA3Q8NHX4 192 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 SLC22A8Q8TCC7 542 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 PAQR8Q8TEZ7 354 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 CCT6BQ92526 530 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 HSPBAP1Q96EW2 488 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 COX4I2Q96KJ9 171 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 SERINC2Q96SA4 455 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 CSF3RQ99062 836 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 YIPF4Q9BSR8 244 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 ALOXE3Q9BYJ1 711 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 REXO4Q9GZR2 422 aaKnown RBP10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 SH2D2AQ9NP31 389 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 ZFP64Q9NPA5 681 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 TRMT1Q9NXH9 659 aaKnown RBP10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 DAPP1Q9UN19 280 aa10.87□□□□□ -0.67
GTF3C1-209ENST00000568569 MPDZO75970 2070 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 C15orf38-AP3S2A0A0A6YYH1 394 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 MYOCOSA0A1B0GUC4 107 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 LRRC3CA6NJW4 275 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 IL2RAP01589 272 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 CCDC175P0C221 793 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 GNAZP19086 355 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 CERS1P27544 350 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 GABRB3P28472 473 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 PCSK6P29122 969 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 ZNF75DP51815 510 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 ZNF136P52737 540 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 MTTPP55157 894 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 WNT3P56703 355 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 ASPHQ12797 758 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 CRYMQ14894 314 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 ZNF791Q3KP31 576 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 PIGGQ5H8A4 983 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 PRAMEF20Q5VT98 475 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 POMZP3Q6PJE2 187 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 ADGRD1Q6QNK2 874 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 SBSNQ6UWP8 590 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 DND1Q8IYX4 353 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 AGGF1Q8N302 714 aaeCLIP10.86□□□□□ -0.676e-10■□□□□ 9
GTF3C1-209ENST00000568569 LRRN4CLQ8ND94 238 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 LINC01560Q8TB33 94 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 NUBPLQ8TB37 319 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 SPACA9Q96E40 222 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 RUNDC3BQ96NL0 473 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 QRFPRQ96P65 431 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 COPS7BQ9H9Q2 264 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 GUCA1BQ9UMX6 200 aa10.86□□□□□ -0.67
GTF3C1-209ENST00000568569 EEF1E1-BLOC1S5C9J1V9 151 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 EEF1E1O43324 174 aaKnown RBP10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 H2AFYO75367 372 aaKnown RBP10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 CLEC3AO75596 197 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 KRT14P02533 472 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 HRGP04196 525 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 C1GALT1C1LP0DN25 315 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 TRPC1P48995 793 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 DUSP8Q13202 625 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 SLBPQ14493 270 aaKnown RBP eCLIP10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 SF3B4Q15427 424 aaKnown RBP eCLIP10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 PPP1R3AQ16821 1122 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 ADPRMQ3LIE5 342 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 Q5PR19 223 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 NSUN5P2Q63ZY6 315 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 ABHD17CQ6PCB6 329 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 SLCO4C1Q6ZQN7 724 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 CXXC5Q7LFL8 322 aaKnown RBP10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 GALNT7Q86SF2 657 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 CXorf67Q86X51 503 aaPredicted RBP10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 P3H2Q8IVL5 708 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 CNTN4Q8IWV2 1026 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 PM20D2Q8IYS1 436 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 KRT78Q8N1N4 520 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 ZNF721Q8TF20 911 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms