RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 TMPRSS3P57727 454 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 TAS2R50P59544 299 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 ZNF763Q0D2J5 394 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 SLC9B1Q4ZJI4 515 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 MFSD4BQ5TF39 518 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 FAAH2Q6GMR7 532 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 LARP4Q71RC2 724 aaKnown RBP eCLIP16.9■□□□□ 0.3
COMMD4-222ENST00000568034 MRGPREQ86SM8 312 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 SNRNP27Q8WVK2 155 aaKnown RBP16.9■□□□□ 0.3
COMMD4-222ENST00000568034 ANKRD9Q96BM1 317 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-222ENST00000568034 WDR55Q9H6Y2 383 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-222ENST00000568034 RPF2Q9H7B2 306 aaKnown RBP16.9■□□□□ 0.3
COMMD4-222ENST00000568034 MYNNQ9NPC7 610 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 PFDN4Q9NQP4 134 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 PRDM9Q9NQV7 894 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 HEY2Q9UBP5 337 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 CES1P1Q9UKY3 287 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 EXO1Q9UQ84 846 aaKnown RBP16.9■□□□□ 0.3
COMMD4-222ENST00000568034 PCDHA9Q9Y5H5 950 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 SPACA6W5XKT8 324 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 PKD1L2Q7Z442 2459 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 LOC102723996A0A087X1L8 192 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 GNG14A0A1W2PPG7 69 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 TCRBV16S1A1N1A0A5B0 115 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 BLACEA4D250 179 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 CDC14CA4D256 554 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 GLOD5A6NK44 160 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 PGRMC2O15173 223 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 PRMT3O60678 531 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 CTNSO60931 367 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 IGHEP01854 428 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 C8orf89P0DMQ9 161 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 BCKDHAP12694 445 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 EPHA3P29320 983 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 GYS2P54840 703 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 UCNP55089 124 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 IGLV3-21P80748 117 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-222ENST00000568034 MC1RQ01726 317 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 ST3GAL2Q16842 350 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 SMU1Q2TAY7 513 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 FAM71E1Q6IPT2 247 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 EPGNQ6UW88 154 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 KIRREL2Q6UWL6 708 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 ANKRD37Q7Z713 158 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 CLNKQ7Z7G1 428 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 RAB43Q86YS6 212 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 LRRC34Q8IZ02 419 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 FNDC5Q8NAU1 212 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 DNAJB14Q8TBM8 379 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 NACC2Q96BF6 587 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 C8orf44Q96CB5 159 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 CRELD1Q96HD1 420 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 EGLN2Q96KS0 407 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 PTCHD1Q96NR3 888 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 C1orf50Q9BV19 199 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 ASIC5Q9NY37 505 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 MRPS33Q9Y291 106 aaKnown RBP16.89■□□□□ 0.29
COMMD4-222ENST00000568034 CFAP47Q6ZTR5 3102 aa16.89■□□□□ 0.29
COMMD4-222ENST00000568034 TRPC5OSA6NMA1 111 aa16.88■□□□□ 0.29
COMMD4-222ENST00000568034 CLDN4O14493 209 aa16.88■□□□□ 0.29
COMMD4-222ENST00000568034 LDB3O75112 727 aa16.88■□□□□ 0.29
COMMD4-222ENST00000568034 MYO1DO94832 1006 aa16.88■□□□□ 0.29
COMMD4-222ENST00000568034 COX6A1P12074 109 aa16.88■□□□□ 0.29
COMMD4-222ENST00000568034 GSTM5P46439 218 aa16.88■□□□□ 0.29
COMMD4-222ENST00000568034 ID2Q02363 134 aa16.88■□□□□ 0.29
COMMD4-222ENST00000568034 EMX2Q04743 252 aa16.88■□□□□ 0.29
COMMD4-222ENST00000568034 VAC14Q08AM6 782 aa16.88■□□□□ 0.29
COMMD4-222ENST00000568034 ATP1A4Q13733 1029 aa16.88■□□□□ 0.29
COMMD4-222ENST00000568034 PCOLCEQ15113 449 aa16.88■□□□□ 0.29
COMMD4-222ENST00000568034 OR52E8Q6IFG1 317 aa16.88■□□□□ 0.29
COMMD4-222ENST00000568034 OGFOD2Q6N063 350 aa16.88■□□□□ 0.29
COMMD4-222ENST00000568034 CGB2Q6NT52 195 aa16.88■□□□□ 0.29
COMMD4-222ENST00000568034 OR11G2Q8NGC1 345 aa16.88■□□□□ 0.29
COMMD4-222ENST00000568034 ZNF317Q96PQ6 595 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-222ENST00000568034 OR52B2Q96RD2 323 aa16.88■□□□□ 0.29
COMMD4-222ENST00000568034 WDR77Q9BQA1 342 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-222ENST00000568034 C5AR2Q9P296 337 aa16.88■□□□□ 0.29
COMMD4-222ENST00000568034 IGHV3-20A0A0C4DH32 117 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 GOLGA8QA0A0J9YX86 632 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 A0A1W2PS29 197 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 C1orf226A1L170 272 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 GOLGA8OA6NCC3 632 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 GOLGA8NF8WBI6 632 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 GUCY1B2O75343 617 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 VPS4BO75351 444 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 TGDSO95455 350 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 ALDOCP09972 364 aaKnown RBP16.87■□□□□ 0.29
COMMD4-222ENST00000568034 LBPP18428 481 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 PPP2R1BP30154 601 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 TLX1P31314 330 aaPredicted RBP16.87■□□□□ 0.29
COMMD4-222ENST00000568034 ERVK-8P63133 956 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 FOLH1Q04609 750 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 EEF1A2Q05639 463 aaKnown RBP16.87■□□□□ 0.29
COMMD4-222ENST00000568034 SLC13A2Q13183 592 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 NSDHLQ15738 373 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 PRSS53Q2L4Q9 553 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 IL23RQ5VWK5 629 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 SLC48A1Q6P1K1 146 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 OR4N5Q8IXE1 308 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 AMER2Q8N7J2 671 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms