RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 C6orf136Q5SQH8 315 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 LARP4Q71RC2 724 aaKnown RBP eCLIP11.91□□□□□ -0.53e-9■□□□□ 9.5
SF3B3-206ENST00000565990 PAGE2Q7Z2X7 111 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 MAVSQ7Z434 540 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 COMMD6Q7Z4G1 85 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 NUDT13Q86X67 352 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 DDIASQ8IXT1 998 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 SHISA5Q8N114 240 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 CA13Q8N1Q1 262 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 C1orf52Q8N6N3 182 aaKnown RBP11.91□□□□□ -0.5
SF3B3-206ENST00000565990 OR5T3Q8NGG3 340 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 OR51Q1Q8NH59 317 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 MR1Q95460 341 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 C19orf60Q96EN9 201 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 PPP3R2Q96LZ3 170 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 OR1F2PQ96R84 312 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 SORBS1Q9BX66 1292 aaKnown RBP11.91□□□□□ -0.5
SF3B3-206ENST00000565990 DPH1Q9BZG8 443 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 ZNF385DQ9H6B1 395 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 CCDC86Q9H6F5 360 aaKnown RBP11.91□□□□□ -0.5
SF3B3-206ENST00000565990 MKKSQ9NPJ1 570 aaPredicted RBP11.91□□□□□ -0.5
SF3B3-206ENST00000565990 ZNF282Q9UDV7 671 aaPredicted RBP11.91□□□□□ -0.5
SF3B3-206ENST00000565990 WBP11Q9Y2W2 641 aaKnown RBP11.91□□□□□ -0.5
SF3B3-206ENST00000565990 TMED5Q9Y3A6 229 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 PCDHGA6Q9Y5G7 932 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 AHCTF1Q8WYP5 2266 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 CROCCQ5TZA2 2017 aa11.91□□□□□ -0.5
SF3B3-206ENST00000565990 CEP295Q9C0D2 2601 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 A0A0G2JN53 185 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 LOC101059948A0A1B0GTJ6 334 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 DPPA5A6NC42 116 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 C21orf140B9A014 251 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 SDHDO14521 159 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 PROM1O43490 865 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 TMPRSS11DO60235 418 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 CNOT3O75175 753 aaKnown RBP11.9□□□□□ -0.5
SF3B3-206ENST00000565990 SEC22BO75396 215 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 BMP10O95393 424 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 FAM58BPP0C7Q3 252 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 TCN2P20062 427 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 FBLP22087 321 aaKnown RBP11.9□□□□□ -0.5
SF3B3-206ENST00000565990 CPA2P48052 419 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 PCBP4P57723 403 aaKnown RBP11.9□□□□□ -0.5
SF3B3-206ENST00000565990 SESN3P58005 492 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 EMX2Q04743 252 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 ACSM2AQ08AH3 577 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 CLN3Q13286 438 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 COL9A2Q14055 689 aaPredicted RBP11.9□□□□□ -0.5
SF3B3-206ENST00000565990 SLC9A5Q14940 896 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 TGIF1Q15583 401 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 PDCD2Q16342 344 aaPredicted RBP11.9□□□□□ -0.5
SF3B3-206ENST00000565990 IMPG1Q17R60 797 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 SYT16Q17RD7 645 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 ACSM2BQ68CK6 577 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 OR52E8Q6IFG1 317 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 NOXRED1Q6NXP6 359 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 FAM198BQ6UWH4 519 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 PGAM4Q8N0Y7 254 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 METTL27Q8N6F8 245 aaPredicted RBP11.9□□□□□ -0.5
SF3B3-206ENST00000565990 STT3BQ8TCJ2 826 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 CT55Q8WUE5 264 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 TM4SF18Q96CE8 201 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 RNF31Q96EP0 1072 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 NUF2Q9BZD4 464 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 KLHL4Q9C0H6 718 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 Q9H521 79 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 AKTIPQ9H8T0 292 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 LRTM1Q9HBL6 345 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 PRDM9Q9NQV7 894 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 RIC8BQ9NVN3 520 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 MS4A12Q9NXJ0 267 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 IFT80Q9P2H3 777 aaPredicted RBP11.9□□□□□ -0.5
SF3B3-206ENST00000565990 FARSAQ9Y285 508 aaKnown RBP11.9□□□□□ -0.5
SF3B3-206ENST00000565990 FRYQ5TBA9 3013 aa11.9□□□□□ -0.5
SF3B3-206ENST00000565990 DMXL2Q8TDJ6 3036 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 ATP6AP2A0A1C7CYW4 349 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 A0A1W2PR48 441 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 DYTNA2CJ06 578 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 H0YJX3 145 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 SKAP2O75563 359 aaPredicted RBP11.89□□□□□ -0.51
SF3B3-206ENST00000565990 ATP6AP2O75787 350 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 RECKO95980 971 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 ZGLP1P0C6A0 271 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 F8A1P23610 371 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 CERS1P27544 350 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 TIA1P31483 386 aaKnown RBP eCLIP11.89□□□□□ -0.511e-9■■□□□ 12
SF3B3-206ENST00000565990 EIF2S3P41091 472 aaKnown RBP11.89□□□□□ -0.51
SF3B3-206ENST00000565990 SSR2P43308 183 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 GSTM5P46439 218 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 RAB38P57729 211 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 OLR1P78380 273 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 MAT1AQ00266 395 aaKnown RBP11.89□□□□□ -0.51
SF3B3-206ENST00000565990 FOXK2Q01167 660 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 NCF4Q15080 339 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 VWA2Q5GFL6 755 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 CCNYL2Q5T2Q4 361 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 ARHGAP40Q5TG30 622 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 VWA5B1Q5TIE3 1220 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 OGFOD2Q6N063 350 aa11.89□□□□□ -0.51
SF3B3-206ENST00000565990 GPR180Q86V85 440 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms