RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 KRT4P19013 534 aa17.65■□□□□ 0.42
SPSB3-207ENST00000565550 TRHRP34981 398 aaPredicted RBP17.65■□□□□ 0.42
SPSB3-207ENST00000565550 HLCSP50747 726 aa17.65■□□□□ 0.42
SPSB3-207ENST00000565550 CDH13P55290 713 aa17.65■□□□□ 0.42
SPSB3-207ENST00000565550 BTN3A2P78410 334 aa17.65■□□□□ 0.42
SPSB3-207ENST00000565550 E2F2Q14209 437 aa17.65■□□□□ 0.42
SPSB3-207ENST00000565550 RASA2Q15283 850 aa17.65■□□□□ 0.42
SPSB3-207ENST00000565550 NCCRP1Q6ZVX7 275 aaPredicted RBP17.65■□□□□ 0.42
SPSB3-207ENST00000565550 GDF7Q7Z4P5 450 aa17.65■□□□□ 0.42
SPSB3-207ENST00000565550 GHDCQ8N2G8 530 aa17.65■□□□□ 0.42
SPSB3-207ENST00000565550 ARMC2Q8NEN0 867 aa17.65■□□□□ 0.42
SPSB3-207ENST00000565550 TMEM237Q96Q45 408 aa17.65■□□□□ 0.42
SPSB3-207ENST00000565550 EFCAB11Q9BUY7 163 aa17.65■□□□□ 0.42
SPSB3-207ENST00000565550 DEFB126Q9BYW3 111 aa17.65■□□□□ 0.42
SPSB3-207ENST00000565550 NT5DC2Q9H857 520 aa17.65■□□□□ 0.42
SPSB3-207ENST00000565550 PPCSQ9HAB8 311 aa17.65■□□□□ 0.42
SPSB3-207ENST00000565550 SEMA4BQ9NPR2 832 aaPredicted RBP17.65■□□□□ 0.42
SPSB3-207ENST00000565550 G3V2L1 256 aa17.64■□□□□ 0.41
SPSB3-207ENST00000565550 GLRA3O75311 464 aa17.64■□□□□ 0.41
SPSB3-207ENST00000565550 PROCP04070 461 aa17.64■□□□□ 0.41
SPSB3-207ENST00000565550 GSTA1P08263 222 aa17.64■□□□□ 0.41
SPSB3-207ENST00000565550 ZNF24P17028 368 aa17.64■□□□□ 0.41
SPSB3-207ENST00000565550 CASP2P42575 452 aa17.64■□□□□ 0.41
SPSB3-207ENST00000565550 ZNF844Q08AG5 666 aa17.64■□□□□ 0.41
SPSB3-207ENST00000565550 DDX39BQ13838 428 aaKnown RBP17.64■□□□□ 0.41
SPSB3-207ENST00000565550 TBCCQ15814 346 aa17.64■□□□□ 0.41
SPSB3-207ENST00000565550 UNC50Q53HI1 259 aa17.64■□□□□ 0.41
SPSB3-207ENST00000565550 GRHL2Q6ISB3 625 aa17.64■□□□□ 0.41
SPSB3-207ENST00000565550 TRABD2AQ86V40 505 aa17.64■□□□□ 0.41
SPSB3-207ENST00000565550 CHERPQ8IWX8 916 aaKnown RBP17.64■□□□□ 0.41
SPSB3-207ENST00000565550 AGAP11Q8TF27 550 aa17.64■□□□□ 0.41
SPSB3-207ENST00000565550 TMEM125Q96AQ2 219 aa17.64■□□□□ 0.41
SPSB3-207ENST00000565550 PHF12Q96QT6 1004 aa17.64■□□□□ 0.41
SPSB3-207ENST00000565550 ACTR8Q9H981 624 aa17.64■□□□□ 0.41
SPSB3-207ENST00000565550 LGALS13Q9UHV8 139 aa17.64■□□□□ 0.41
SPSB3-207ENST00000565550 TRBV11-1A0A0K0K1C0 115 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 ANKDD1BA6NHY2 528 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 C19orf84I3L1E1 186 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 FCHO1O14526 889 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 SPAG7O75391 227 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 MYO1DO94832 1006 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 CLDN14O95500 239 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 ARL1P40616 181 aaPredicted RBP17.63■□□□□ 0.41
SPSB3-207ENST00000565550 STXBP1P61764 594 aaKnown RBP17.63■□□□□ 0.41
SPSB3-207ENST00000565550 SLC18A2Q05940 514 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 TRAF3Q13114 568 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 RUNX2Q13950 521 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 CPSF6Q16630 551 aaKnown RBP eCLIP17.63■□□□□ 0.41
SPSB3-207ENST00000565550 MED27Q6P2C8 311 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 DOLPP1Q86YN1 238 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 LAS2Q8IYD9 372 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 ARMC10Q8N2F6 343 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 APCDD1LQ8NCL9 501 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 B3GNT7Q8NFL0 401 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 OR7G3Q8NG95 312 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 ZNF483Q8TF39 744 aaPredicted RBP17.63■□□□□ 0.41
SPSB3-207ENST00000565550 ZNF473Q8WTR7 871 aaKnown RBP17.63■□□□□ 0.41
SPSB3-207ENST00000565550 MTFMTQ96DP5 389 aaKnown RBP17.63■□□□□ 0.41
SPSB3-207ENST00000565550 MS4A6EQ96DS6 147 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 FAR2Q96K12 515 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 ZIM3Q96PE6 472 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 F2RL3Q96RI0 385 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 DCDC2Q9UHG0 476 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 TMCO1Q9UM00 188 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 MMACHCQ9Y4U1 282 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 TNPO3Q9Y5L0 923 aaKnown RBP17.63■□□□□ 0.41
SPSB3-207ENST00000565550 PKDREJQ9NTG1 2253 aa17.63■□□□□ 0.41
SPSB3-207ENST00000565550 LRIT2A6NDA9 550 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 SAP18O00422 153 aaKnown RBP17.62■□□□□ 0.41
SPSB3-207ENST00000565550 COPEO14579 308 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 ERI3O43414 337 aaKnown RBP17.62■□□□□ 0.41
SPSB3-207ENST00000565550 PLIN3O60664 434 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 CLEC3AO75596 197 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 TGFB1P01137 390 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 CRHR1P34998 444 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 CLCN2P51788 898 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 PCDH1Q08174 1060 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 LAPTM5Q13571 262 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 KRT71Q3SY84 523 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 PAGE2BQ5JRK9 111 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 ZNF678Q5SXM1 525 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 C3P1Q6ZMU1 363 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 FGD2Q7Z6J4 655 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 SULF2Q8IWU5 870 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 RIBC1Q8N443 379 aaPredicted RBP17.62■□□□□ 0.41
SPSB3-207ENST00000565550 GAL3ST3Q96A11 431 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 MS4A8Q9BY19 250 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 TRIM8Q9BZR9 551 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 ROPN1BQ9BZX4 212 aaPredicted RBP17.62■□□□□ 0.41
SPSB3-207ENST00000565550 ROPN1Q9HAT0 212 aaPredicted RBP17.62■□□□□ 0.41
SPSB3-207ENST00000565550 PRM3Q9NNZ6 103 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 PNO1Q9NRX1 252 aaKnown RBP17.62■□□□□ 0.41
SPSB3-207ENST00000565550 ZNF225Q9UK10 706 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 FBXW2Q9UKT8 454 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 APCP25054 2843 aa17.62■□□□□ 0.41
SPSB3-207ENST00000565550 RTCAO00442 366 aaKnown RBP17.61■□□□□ 0.41
SPSB3-207ENST00000565550 PRRG2O14669 202 aa17.61■□□□□ 0.41
SPSB3-207ENST00000565550 POU3F2P20265 443 aaPredicted RBP17.61■□□□□ 0.41
SPSB3-207ENST00000565550 TAC1P20366 129 aa17.61■□□□□ 0.41
SPSB3-207ENST00000565550 ATP5F1P24539 256 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms