RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 COPS7AQ9UBW8 275 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 ZNF223Q9UK11 482 aaPredicted RBP5.96□□□□□ -1.46
TCF4-228ENST00000565393 ITGB1BP2Q9UKP3 347 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 PPIEQ9UNP9 301 aaKnown RBP5.96□□□□□ -1.46
TCF4-228ENST00000565393 ASB1Q9Y576 335 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 PCDHGA11Q9Y5H2 935 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 TNPO3Q9Y5L0 923 aaKnown RBP5.96□□□□□ -1.46
TCF4-228ENST00000565393 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.96□□□□□ -1.46
TCF4-228ENST00000565393 MED13Q9UHV7 2174 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 PIKFYVEQ9Y2I7 2098 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 SPTBP11277 2137 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 ATP6AP2A0A1C7CYW4 349 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 ESYT3A0FGR9 886 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 LRRC14BA6NHZ5 514 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 GLOD5A6NK44 160 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 TMEM200CA6NKL6 621 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 WASHC1A8K0Z3 465 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 NPIPA2E9PIF3 369 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 NPIPA3F8WFD2 350 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 ACOT7O00154 380 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 FGF17O60258 216 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 OR10H2O60403 315 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 FLNBO75369 2602 aaKnown RBP5.95□□□□□ -1.46
TCF4-228ENST00000565393 ATP6AP2O75787 350 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 KLHL2O95198 593 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 ETHE1O95571 254 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 C1QAP02745 245 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 FAM58BPP0C7Q3 252 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 BUD31P41223 144 aaPredicted RBP5.95□□□□□ -1.46
TCF4-228ENST00000565393 PIK3CBP42338 1070 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 KIR3DL1P43629 444 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 HK2P52789 917 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 ALDH18A1P54886 795 aaKnown RBP5.95□□□□□ -1.46
TCF4-228ENST00000565393 RPS13P62277 151 aaKnown RBP5.95□□□□□ -1.46
TCF4-228ENST00000565393 CKAP4Q07065 602 aaKnown RBP5.95□□□□□ -1.46
TCF4-228ENST00000565393 PMPCAQ10713 525 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 ASPHQ12797 758 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 NAB1Q13506 487 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 GTF2H2Q13888 395 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 ZNF267Q14586 743 aaPredicted RBP5.95□□□□□ -1.46
TCF4-228ENST00000565393 SLC10A1Q14973 349 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 CDSNQ15517 529 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 CMPK2Q5EBM0 449 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 SGO1Q5FBB7 561 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 PIGGQ5H8A4 983 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 TEX35Q5T0J7 233 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 LIPJQ5W064 366 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 SLC22A10Q63ZE4 541 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 C18orf63Q68DL7 685 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 GRHL2Q6ISB3 625 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 C8orf74Q6P047 294 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 GTF2H2CQ6P1K8 395 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 ZNF585AQ6P3V2 769 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 ARHGAP11AQ6P4F7 1023 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 CYP20A1Q6UW02 462 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 ZNF793Q6ZN11 406 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 RTL4Q6ZR62 310 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 RGS9BPQ6ZS82 235 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 CCDC91Q7Z6B0 441 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 FGD2Q7Z6J4 655 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 SLC22A16Q86VW1 577 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 ZFP62Q8NB50 900 aaPredicted RBP5.95□□□□□ -1.46
TCF4-228ENST00000565393 PSD4Q8NDX1 1056 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 OR2M7Q8NG81 312 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 OR5M9Q8NGP3 310 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 OR8K3Q8NH51 312 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 OR14A16Q8NHC5 309 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 RHEBL1Q8TAI7 183 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 RND1Q92730 232 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 TANKQ92844 425 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 ATOH8Q96SQ7 321 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 FAM173AQ9BQD7 235 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 EXO5Q9H790 373 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 WDR41Q9HAD4 459 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 SNX15Q9NRS6 342 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 SACM1LQ9NTJ5 587 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 DEPPQ9NTK1 212 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 MTRF1LQ9UGC7 380 aaKnown RBP5.95□□□□□ -1.46
TCF4-228ENST00000565393 PHF11Q9UIL8 331 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 RNF11Q9Y3C5 154 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 ATG4BQ9Y4P1 393 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 CLDN16Q9Y5I7 305 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 HRH3Q9Y5N1 445 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 IKBKGQ9Y6K9 419 aa5.95□□□□□ -1.46
TCF4-228ENST00000565393 UBR5O95071 2799 aaPredicted RBP5.95□□□□□ -1.46
TCF4-228ENST00000565393 A0A1W2PR48 441 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 PINLYPA6NC86 204 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 POC1B-GALNT4F8VUJ3 575 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 C19orf84I3L1E1 186 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 PLPP1O14494 284 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 ADAM10O14672 748 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 PROM1O43490 865 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 SIX3O95343 332 aaPredicted RBP5.94□□□□□ -1.46
TCF4-228ENST00000565393 CLDN9O95484 217 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 GPR75O95800 540 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 GBAP04062 536 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 INHBAP08476 426 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 RBP1P09455 135 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 MTHFD2P13995 350 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 ALOX15P16050 662 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms