RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 CCDC77Q9BR77 488 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 ZNF717Q9BY31 904 aaPredicted RBP9.32□□□□□ -0.92
CMTM3-209ENST00000565003 OR8D2Q9GZM6 311 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 VPS11Q9H270 941 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 ACTR8Q9H981 624 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 DEPPQ9NTK1 212 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 ZNF358Q9NW07 568 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 CPSF2Q9P2I0 782 aaKnown RBP9.32□□□□□ -0.92
CMTM3-209ENST00000565003 MYOTQ9UBF9 498 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 MTRF1LQ9UGC7 380 aaKnown RBP9.32□□□□□ -0.92
CMTM3-209ENST00000565003 YARS2Q9Y2Z4 477 aaKnown RBP9.32□□□□□ -0.92
CMTM3-209ENST00000565003 TSC22D4Q9Y3Q8 395 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 ANGPTL3Q9Y5C1 460 aa9.32□□□□□ -0.92
CMTM3-209ENST00000565003 NCOA6Q14686 2063 aaPredicted RBP9.32□□□□□ -0.92
CMTM3-209ENST00000565003 CENPEQ02224 2701 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 PINLYPA6NC86 204 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 A8MVJ9 347 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 C17orf105B2RV13 164 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 H0YIV9 168 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 WWP2O00308 870 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 TFECO14948 347 aaPredicted RBP9.31□□□□□ -0.92
CMTM3-209ENST00000565003 HS6ST1O60243 411 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 UGDHO60701 494 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 ZNF354AO60765 605 aaPredicted RBP9.31□□□□□ -0.92
CMTM3-209ENST00000565003 OR6B1O95007 311 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 INHBAP08476 426 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 PRF1P14222 555 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 ABOP16442 354 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 SOX3P41225 446 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 MAGEA12P43365 314 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 PIK3CGP48736 1102 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 NR0B1P51843 470 aaKnown RBP9.31□□□□□ -0.92
CMTM3-209ENST00000565003 RAP1GDS1P52306 607 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 CASP6P55212 293 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 RPS13P62277 151 aaKnown RBP9.31□□□□□ -0.92
CMTM3-209ENST00000565003 RNF4P78317 190 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 IGLV3-21P80748 117 aaPredicted RBP9.31□□□□□ -0.92
CMTM3-209ENST00000565003 TNFRSF17Q02223 184 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 ART3Q13508 389 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 GTF2H2Q13888 395 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 SERTAD2Q14140 314 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 CDSNQ15517 529 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 CPSF6Q16630 551 aaKnown RBP eCLIP9.31□□□□□ -0.92
CMTM3-209ENST00000565003 CMPK2Q5EBM0 449 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 LIPJQ5W064 366 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 C18orf63Q68DL7 685 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 SP5Q6BEB4 398 aaPredicted RBP9.31□□□□□ -0.92
CMTM3-209ENST00000565003 GTF2H2CQ6P1K8 395 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 MTFR2Q6P444 385 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 RPTNQ6XPR3 784 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 HSDL2Q6YN16 418 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 BNC2Q6ZN30 1099 aaPredicted RBP9.31□□□□□ -0.92
CMTM3-209ENST00000565003 TICAM1Q8IUC6 712 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 LURAP1LQ8IV03 231 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 SLC34A3Q8N130 599 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 ZCCHC7Q8N3Z6 543 aaKnown RBP9.31□□□□□ -0.92
CMTM3-209ENST00000565003 PTGR2Q8N8N7 351 aaPredicted RBP9.31□□□□□ -0.92
CMTM3-209ENST00000565003 L3MBTL4Q8NA19 623 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 POGLUT1Q8NBL1 392 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 OR14A16Q8NHC5 309 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 C16orf52Q8NHV5 167 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 ZNF721Q8TF20 911 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 ASB15Q8WXK1 588 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 MARVELD3Q96A59 401 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 RGMAQ96B86 450 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 CDK15Q96Q40 435 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 PHF12Q96QT6 1004 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 RASL10BQ96S79 203 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 PAFAH2Q99487 392 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 FMO2Q99518 471 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 RPF2Q9H7B2 306 aaKnown RBP9.31□□□□□ -0.92
CMTM3-209ENST00000565003 IPPKQ9H8X2 491 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 TIMMDC1Q9NPL8 285 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 HPF1Q9NWY4 346 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 ADGRE2Q9UHX3 823 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 ERVK-11Q9UQG0 969 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 MEMO1Q9Y316 297 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 RNF11Q9Y3C5 154 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 ATG4BQ9Y4P1 393 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 PCDHGA11Q9Y5H2 935 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 KLF2Q9Y5W3 355 aaPredicted RBP9.31□□□□□ -0.92
CMTM3-209ENST00000565003 SPACA6W5XKT8 324 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 GTF3C1Q12789 2109 aa9.31□□□□□ -0.92
CMTM3-209ENST00000565003 A0A0A6YYD5 115 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 A0A0G2JMM0 328 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 A0A1B0GTH9 108 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 A0A1W2PPB8 328 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 A0A1W2PRS3 328 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 WASHC1A8K0Z3 465 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 KIR3DP1A8MWS1 328 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 KLRC4-KLRK1H3BQV0 150 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 HRKO00198 91 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 OR7A17O14581 309 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 ADAM10O14672 748 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 HNRNPRO43390 633 aaKnown RBP9.3□□□□□ -0.92
CMTM3-209ENST00000565003 TMPRSS11DO60235 418 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 EEDO75530 441 aaKnown RBP9.3□□□□□ -0.92
CMTM3-209ENST00000565003 TUBB4AP04350 444 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 ESRRAP11474 423 aaPredicted RBP9.3□□□□□ -0.92
CMTM3-209ENST00000565003 TNNI3P19429 210 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms