RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 TMCO1Q9UM00 188 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 CLCA3PQ9Y6N3 262 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 NAV2Q8IVL1 2488 aa18.6■□□□□ 0.57
SHCBP1-203ENST00000564272 SYNDIG1LA6NDD5 238 aa18.59■□□□□ 0.57
SHCBP1-203ENST00000564272 RIPK2O43353 540 aa18.59■□□□□ 0.57
SHCBP1-203ENST00000564272 EEDO75530 441 aaKnown RBP18.59■□□□□ 0.57
SHCBP1-203ENST00000564272 ITGA10O75578 1167 aa18.59■□□□□ 0.57
SHCBP1-203ENST00000564272 CLDN9O95484 217 aa18.59■□□□□ 0.57
SHCBP1-203ENST00000564272 SNRPAP09012 282 aaKnown RBP18.59■□□□□ 0.57
SHCBP1-203ENST00000564272 HNRNPH2P55795 449 aaKnown RBP18.59■□□□□ 0.57
SHCBP1-203ENST00000564272 RPS27LQ71UM5 84 aaKnown RBP18.59■□□□□ 0.57
SHCBP1-203ENST00000564272 TRMT10CQ7L0Y3 403 aaKnown RBP18.59■□□□□ 0.57
SHCBP1-203ENST00000564272 OR4N5Q8IXE1 308 aa18.59■□□□□ 0.57
SHCBP1-203ENST00000564272 GSPT2Q8IYD1 628 aaKnown RBP18.59■□□□□ 0.57
SHCBP1-203ENST00000564272 OR14A16Q8NHC5 309 aa18.59■□□□□ 0.57
SHCBP1-203ENST00000564272 ATP6V1E2Q96A05 226 aa18.59■□□□□ 0.57
SHCBP1-203ENST00000564272 MRPL57Q9BQC6 102 aaKnown RBP18.59■□□□□ 0.57
SHCBP1-203ENST00000564272 OR8D2Q9GZM6 311 aa18.59■□□□□ 0.57
SHCBP1-203ENST00000564272 MRPL46Q9H2W6 279 aaKnown RBP18.59■□□□□ 0.57
SHCBP1-203ENST00000564272 ZBTB26Q9HCK0 441 aa18.59■□□□□ 0.57
SHCBP1-203ENST00000564272 TMEM200CA6NKL6 621 aa18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 C17orf105B2RV13 164 aa18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 CDK2AP1O14519 115 aa18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 ZFAND5O76080 213 aa18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 SBK3P0C264 359 aa18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 TNNI3P19429 210 aa18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 PTX3P26022 381 aaPredicted RBP18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 CCNG1P51959 295 aa18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 TNFRSF17Q02223 184 aa18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 ALDH6A1Q02252 535 aaKnown RBP18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 TRAF3Q13114 568 aa18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 SERTAD2Q14140 314 aa18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 FAM219BQ5XKK7 198 aa18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 C18orf63Q68DL7 685 aa18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 MAMDC2Q7Z304 686 aaPredicted RBP18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 GPR180Q86V85 440 aa18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 ZCCHC7Q8N3Z6 543 aaKnown RBP18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 TMEM156Q8N614 296 aa18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 CPSF7Q8N684 471 aaKnown RBP18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 FAM98AQ8NCA5 519 aaKnown RBP18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 MORN4Q8NDC4 146 aa18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 DAZLQ92904 295 aaKnown RBP18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 SEMA4BQ9NPR2 832 aaPredicted RBP18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 PHF11Q9UIL8 331 aa18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 ATG4BQ9Y4P1 393 aa18.58■□□□□ 0.56
SHCBP1-203ENST00000564272 A0A0A6YYD5 115 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 TRGV8A0A0C4DH27 118 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 A8MT66 165 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 NPIPA5E9PKD4 350 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 TMPRSS11DO60235 418 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 ZG16O60844 167 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 RPS17P08708 135 aaKnown RBP18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 COL8A1P27658 744 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 BSGP35613 385 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 SSR4P51571 173 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 PER3P56645 1201 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 IGLV3-21P80748 117 aaPredicted RBP18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 SIAH3Q8IW03 269 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 CYP4Z2PQ8N1L4 340 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 TMEM151AQ8N4L1 468 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 SLC2A12Q8TD20 617 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 TMEM125Q96AQ2 219 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 MTFMTQ96DP5 389 aaKnown RBP18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 GPR137Q96N19 417 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 TXLNGYQ9BZA5 131 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 RPF2Q9H7B2 306 aaKnown RBP18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 MS4A12Q9NXJ0 267 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 SH3BGRL2Q9UJC5 107 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 NPIPA1Q9UND3 350 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 NBPF19A0A087WUL8 3843 aa18.57■□□□□ 0.56
SHCBP1-203ENST00000564272 A0A1B0GTL3 188 aa18.56■□□□□ 0.56
SHCBP1-203ENST00000564272 A0A1B0GUH1 482 aa18.56■□□□□ 0.56
SHCBP1-203ENST00000564272 FOXE1O00358 373 aaPredicted RBP18.56■□□□□ 0.56
SHCBP1-203ENST00000564272 OR2J2O76002 312 aa18.56■□□□□ 0.56
SHCBP1-203ENST00000564272 FOLH1Q04609 750 aa18.56■□□□□ 0.56
SHCBP1-203ENST00000564272 CUL3Q13618 768 aa18.56■□□□□ 0.56
SHCBP1-203ENST00000564272 RNFT1Q5M7Z0 435 aa18.56■□□□□ 0.56
SHCBP1-203ENST00000564272 MRM1Q6IN84 353 aaKnown RBP18.56■□□□□ 0.56
SHCBP1-203ENST00000564272 ADGRD1Q6QNK2 874 aa18.56■□□□□ 0.56
SHCBP1-203ENST00000564272 HSDL2Q6YN16 418 aa18.56■□□□□ 0.56
SHCBP1-203ENST00000564272 DGAT2L6Q6ZPD8 337 aa18.56■□□□□ 0.56
SHCBP1-203ENST00000564272 ZNF483Q8TF39 744 aaPredicted RBP18.56■□□□□ 0.56
SHCBP1-203ENST00000564272 RELTQ969Z4 430 aa18.56■□□□□ 0.56
SHCBP1-203ENST00000564272 NTMT1Q9BV86 223 aa18.56■□□□□ 0.56
SHCBP1-203ENST00000564272 EPB41L4BQ9H329 900 aa18.56■□□□□ 0.56
SHCBP1-203ENST00000564272 DDX31Q9H8H2 851 aaKnown RBP18.56■□□□□ 0.56
SHCBP1-203ENST00000564272 YARS2Q9Y2Z4 477 aaKnown RBP18.56■□□□□ 0.56
SHCBP1-203ENST00000564272 WASHC1A8K0Z3 465 aa18.55■□□□□ 0.56
SHCBP1-203ENST00000564272 WWP2O00308 870 aa18.55■□□□□ 0.56
SHCBP1-203ENST00000564272 PPP6CO00743 305 aa18.55■□□□□ 0.56
SHCBP1-203ENST00000564272 GBAP04062 536 aa18.55■□□□□ 0.56
SHCBP1-203ENST00000564272 ZNF24P17028 368 aa18.55■□□□□ 0.56
SHCBP1-203ENST00000564272 TSPAN8P19075 237 aa18.55■□□□□ 0.56
SHCBP1-203ENST00000564272 RFC3P40938 356 aa18.55■□□□□ 0.56
SHCBP1-203ENST00000564272 STT3AP46977 705 aa18.55■□□□□ 0.56
SHCBP1-203ENST00000564272 MEOX1P50221 254 aa18.55■□□□□ 0.56
SHCBP1-203ENST00000564272 HK2P52789 917 aa18.55■□□□□ 0.56
SHCBP1-203ENST00000564272 ARFIP1P53367 373 aa18.55■□□□□ 0.56
SHCBP1-203ENST00000564272 CDH13P55290 713 aa18.55■□□□□ 0.56
SHCBP1-203ENST00000564272 RBPJQ06330 500 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms