RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 OR6B1O95007 311 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 TGFB1P01137 390 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 RNF4P78317 190 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 SETDB1Q15047 1291 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 LIPJQ5W064 366 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 OR4C11Q6IEV9 310 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 METTL2BQ6P1Q9 378 aaKnown RBP15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 C16orf47Q6ZP98 133 aaPredicted RBP15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 CCDC25Q86WR0 208 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 ZCCHC7Q8N3Z6 543 aaKnown RBP15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 GOLM1Q8NBJ4 401 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 OR5L2Q8NGL0 311 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 SLC2A12Q8TD20 617 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 ASB15Q8WXK1 588 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 EXT2Q93063 718 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 SGCZQ96LD1 299 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 SPOCK3Q9BQ16 436 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 TRIM8Q9BZR9 551 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 ZDHHC11Q9H8X9 412 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 ZDHHC18Q9NUE0 388 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 PSD3Q9NYI0 1048 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 ERVK-11Q9UQG0 969 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 PDZD2O15018 2839 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 CSMD1Q96PZ7 3565 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 H0YIV9 168 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 C19orf84I3L1E1 186 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 UGDHO60701 494 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 GLSO94925 669 aaPredicted RBP15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 C2P06681 752 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 RFC3P40938 356 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 SOX3P41225 446 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 STT3AP46977 705 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 GPR85P60893 370 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 ACAP2Q15057 778 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 PCBP2Q15366 365 aaKnown RBP eCLIP15.96■□□□□ 0.156e-6■■■■□ 19.3
VPS9D1-203ENST00000563798 FAM83EQ2M2I3 478 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 MPEG1Q2M385 716 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 ARHGAP11AQ6P4F7 1023 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 ZNF295-AS1Q8N0V1 137 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 ZNF321PQ8N8H1 164 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 OR2M7Q8NG81 312 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 OR52N2Q8NGI0 321 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 HUS1BQ8NHY5 278 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 NUBPLQ8TB37 319 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 ZNF721Q8TF20 911 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 KCTD4Q8WVF5 259 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 RGMAQ96B86 450 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 TREX2Q9BQ50 279 aaPredicted RBP15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 OR8D2Q9GZM6 311 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 ENKD1Q9H0I2 346 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 LIN28AQ9H9Z2 209 aaKnown RBP15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 PCDHGA11Q9Y5H2 935 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 HRH3Q9Y5N1 445 aa15.96■□□□□ 0.15
VPS9D1-203ENST00000563798 OTOGQ6ZRI0 2925 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 PINLYPA6NC86 204 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 WWP2O00308 870 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 FGF17O60258 216 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 ETHE1O95571 254 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 IGKV3-11P04433 115 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 PCNAP12004 261 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 TNNI3P19429 210 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 CNR1P21554 472 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 CPN2P22792 545 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 SSR2P43308 183 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 KIR3DL1P43629 444 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 ALDH18A1P54886 795 aaKnown RBP15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 HYAL4Q2M3T9 481 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 NDUFAF5Q5TEU4 345 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 PAOXQ6QHF9 649 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 OPN5Q6U736 354 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 IL20RBQ6UXL0 311 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 SYT10Q6XYQ8 523 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 RTL4Q6ZR62 310 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 NCCRP1Q6ZVX7 275 aaPredicted RBP15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 RELL1Q8IUW5 271 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 TEX9Q8N6V9 391 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 TANKQ92844 425 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 SCYL1Q96KG9 808 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 GPR78Q96P69 363 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 FUT8Q9BYC5 575 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 OR51B5Q9H339 312 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 RPF2Q9H7B2 306 aaKnown RBP15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 DMRT3Q9NQL9 472 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 SNX15Q9NRS6 342 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 PHF11Q9UIL8 331 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 PPT2Q9UMR5 302 aa15.95■□□□□ 0.14
VPS9D1-203ENST00000563798 DCHS2Q6V1P9 2916 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 MYOCOSA0A1B0GUC4 107 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 ZNF354AO60765 605 aaPredicted RBP15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 KLHL2O95198 593 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 IGHG3P01860 377 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 COX7A2P14406 83 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 PTX3P26022 381 aaPredicted RBP15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 ELAVL4P26378 380 aaKnown RBP15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 PPIAP62937 165 aaKnown RBP15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 IRF9Q00978 393 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 SLAMF1Q13291 335 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 CUL3Q13618 768 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 PIGGQ5H8A4 983 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 EMC4Q5J8M3 183 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms