RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 DVL2O14641 736 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 SMAD7O15105 426 aaKnown RBP9.51□□□□□ -0.89
SF3B3-204ENST00000563739 CLPSP04118 112 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 IGKV3-11P04433 115 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 C8GP07360 202 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 SERPINA6P08185 405 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 CCND1P24385 295 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 CERS1P27544 350 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 CCKARP32238 428 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 SLCO1A2P46721 670 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 KCNJ1P48048 391 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 TRPC1P48995 793 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 RGS1Q08116 209 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 FOXF2Q12947 444 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 DHX34Q14147 1143 aaKnown RBP9.51□□□□□ -0.89
SF3B3-204ENST00000563739 HECTD2Q5U5R9 776 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 DUPD1Q68J44 220 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 DRICH1Q6PGQ1 229 aaPredicted RBP9.51□□□□□ -0.89
SF3B3-204ENST00000563739 SBSNQ6UWP8 590 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 PLXDC2Q6UX71 529 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 HSDL2Q6YN16 418 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 ZNF793Q6ZN11 406 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 LRRC75A-AS1Q8N1F1 130 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 UBL4BQ8N7F7 174 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 OR8K3Q8NH51 312 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 MBD3L2Q8NHZ7 208 aaPredicted RBP9.51□□□□□ -0.89
SF3B3-204ENST00000563739 SLC2A12Q8TD20 617 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 GAL3ST3Q96A11 431 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 LINGO1Q96FE5 620 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 TIMP4Q99727 224 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 PIP5K1AQ99755 562 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 PIGQQ9BRB3 760 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 HAUS8Q9BT25 410 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 FRMD8P1Q9BZ68 369 aaPredicted RBP9.51□□□□□ -0.89
SF3B3-204ENST00000563739 UBQLN3Q9H347 655 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 PELI2Q9HAT8 420 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 ACKR4Q9NPB9 350 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 ALKBH4Q9NXW9 302 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 ZNF629Q9UEG4 869 aaPredicted RBP9.51□□□□□ -0.89
SF3B3-204ENST00000563739 FBXO5Q9UKT4 447 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 WIF1Q9Y5W5 379 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.51□□□□□ -0.89
SF3B3-204ENST00000563739 PRR14LQ5THK1 2151 aa9.51□□□□□ -0.89
SF3B3-204ENST00000563739 TRIM3O75382 744 aaPredicted RBP9.5□□□□□ -0.89
SF3B3-204ENST00000563739 GOSR1O95249 250 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 OPRM1P35372 400 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 GRK3P35626 688 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 LIM2P55344 173 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 BTN3A2P78410 334 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 IGLV3-21P80748 117 aaPredicted RBP9.5□□□□□ -0.89
SF3B3-204ENST00000563739 DUSP8Q13202 625 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 C18orf21Q32NC0 220 aaPredicted RBP9.5□□□□□ -0.89
SF3B3-204ENST00000563739 PIGGQ5H8A4 983 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 NSUN5P2Q63ZY6 315 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 BICRALQ6AI39 1079 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 NIPAL1Q6NVV3 410 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 UBE3DQ7Z6J8 389 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 ADGRE4PQ86SQ3 457 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 TMPRSS11BQ86T26 416 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 LACC1Q8IV20 430 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 CCDC89Q8N998 374 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 MORN4Q8NDC4 146 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 OR10G3Q8NGC4 313 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 SMPDL3BQ92485 455 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 ANKRD9Q96BM1 317 aaPredicted RBP9.5□□□□□ -0.89
SF3B3-204ENST00000563739 SGCZQ96LD1 299 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 CCDC77Q9BR77 488 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 G6PC3Q9BUM1 346 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 OR8D2Q9GZM6 311 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 EPB41L4BQ9H329 900 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 ZFP64Q9NPA5 681 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 GALNT8Q9NY28 637 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 VTI1BQ9UEU0 232 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 FOXD3Q9UJU5 478 aaPredicted RBP9.5□□□□□ -0.89
SF3B3-204ENST00000563739 TESMINQ9Y4I5 508 aa9.5□□□□□ -0.89
SF3B3-204ENST00000563739 ABCA1O95477 2261 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 CTAGE9A4FU28 777 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 LRIT2A6NDA9 550 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 FAM171A2A8MVW0 826 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 FAM47E-STBD1D6RA91 191 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 PSMD12O00232 456 aaPredicted RBP9.49□□□□□ -0.89
SF3B3-204ENST00000563739 CRLF1O75462 422 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 SOX30O94993 753 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 NID1P14543 1247 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 TERF1P54274 439 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 ID2Q02363 134 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 ASPHQ12797 758 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 CCNG2Q16589 344 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 MPEG1Q2M385 716 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 NXPE4Q6UWF7 544 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 YTHDF3Q7Z739 585 aaKnown RBP9.49□□□□□ -0.89
SF3B3-204ENST00000563739 ZNF595Q8IYB9 648 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 C2CD4AQ8NCU7 369 aaPredicted RBP9.49□□□□□ -0.89
SF3B3-204ENST00000563739 LRRN4CLQ8ND94 238 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 SIMC1Q8NDZ2 872 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 ARMC2Q8NEN0 867 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 OR14A16Q8NHC5 309 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 DOK4Q8TEW6 326 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 WDYHV1Q96HA8 205 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 SIGLEC10Q96LC7 697 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms