RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 CDHR1Q96JP9 859 aa2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 SDHCQ99643 169 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 INPP5KQ9BT40 448 aa2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 TMED7Q9Y3B3 224 aa2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 WI2-2373I1.2A0A1W2PRP0 233 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 C5orf52A6NGY3 159 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 TSPY2A6NKD2 308 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 CCDC159P0C7I6 412 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 FAM58BPP0C7Q3 252 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 FOSL2P15408 326 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 GJB2P29033 226 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 CDO1Q16878 200 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 LYPLAL1Q5VWZ2 237 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 WSCD1Q658N2 575 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 IGFL3Q6UXB1 125 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 SPATA21Q7Z572 469 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 RNF149Q8NC42 400 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 TBCKQ8TEA7 893 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 EXOC4Q96A65 974 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 BSCL2Q96G97 398 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 ERGIC2Q96RQ1 377 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 ZNF665Q9H7R5 613 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 VIPAS39Q9H9C1 493 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 AMBNQ9NP70 447 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 ZNF319Q9P2F9 582 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 MOKQ9UQ07 419 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 RNF24Q9Y225 148 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 ETV7Q9Y603 341 aa2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 CFAP65Q6ZU64 1925 aaKnown RBP2.22□□□□□ -2.05
HMGB1P33-201ENST00000563485 PFASO15067 1338 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 TMEM129A0AVI4 362 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 DUSP11O75319 330 aaKnown RBP2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 GRAP2O75791 330 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 LYPD3O95274 346 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 ODC1P11926 461 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 FNTAP49354 379 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 SLC25A1P53007 311 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 RIPK4P57078 832 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 ERVPABLB-1P60509 514 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 PAX2Q02962 417 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 FOLH1Q04609 750 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 SLC17A1Q14916 467 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 TOMM20Q15388 145 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 ISXQ2M1V0 245 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 C14orf28Q4W4Y0 310 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 PM20D1Q6GTS8 502 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 ZNF544Q6NX49 715 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 ABRAXAS1Q6UWZ7 409 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 ADGRD2Q7Z7M1 963 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 ANKRD46Q86W74 232 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 TIGD4Q8IY51 512 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 LINC01006Q8NI28 216 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 MINDY3Q9H8M7 445 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 EXOC6BQ9Y2D4 811 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 KIAA1217Q5T5P2 1943 aa2.21□□□□□ -2.06
HMGB1P33-201ENST00000563485 ILVBLA1L0T0 632 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 SELENOFO60613 162 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 CLN5O75503 358 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 OR6A2O95222 327 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 RPN1P04843 607 aaKnown RBP2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 FCGR3AP08637 254 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 VIMP08670 466 aaKnown RBP2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 P0C879 139 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 CD1EP15812 388 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 ZNF32P17041 273 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 PRKCIP41743 596 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 FKBP1BP68106 108 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 GSTO1P78417 241 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 LCP2Q13094 533 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 KIAA0040Q15053 153 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 RALBP1Q15311 655 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 TGIF1Q15583 401 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 CNPY1Q3B7I2 92 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 C1orf141Q5JVX7 400 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 WDR25Q64LD2 544 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 IGFL2Q6UWQ7 119 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 FBXO16Q8IX29 292 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 Q8NFD4 153 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 ZNF671Q8TAW3 534 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 ZNF564Q8TBZ8 553 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 VN1R17PQ8TDU5 208 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 SGF29Q96ES7 293 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 ABCC13Q9NSE7 274 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 NKIRAS2Q9NYR9 191 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 ABCG2Q9UNQ0 655 aa2.2□□□□□ -2.06
HMGB1P33-201ENST00000563485 HTR3EA5X5Y0 456 aa2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 CCT8L1PA6NM43 557 aa2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 CSO75390 466 aaKnown RBP2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 PDGFBP01127 241 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 HOXC4P09017 264 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 P4HA1P13674 534 aa2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 PGAM2P15259 253 aa2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 KRT20P35900 424 aa2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 MAGEA9P43362 315 aa2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 NPBWR1P48145 328 aa2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 NDST1P52848 882 aa2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 RPL27P61353 136 aaKnown RBP2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 CKAP4Q07065 602 aaKnown RBP2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 PPP1R3AQ16821 1122 aa2.19□□□□□ -2.06
HMGB1P33-201ENST00000563485 IQCCQ4KMZ1 466 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms