RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 SEC24AO95486 1093 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 ASS1P00966 412 aaKnown RBP4.49□□□□□ -1.69
LINC00254-201ENST00000563416 KRT19P08727 400 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 OR4Q2P0C623 313 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 WARSP23381 471 aaKnown RBP4.49□□□□□ -1.69
LINC00254-201ENST00000563416 GTF2H1P32780 548 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 LHX1P48742 406 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 VAMP7P51809 220 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 CAPZA1P52907 286 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 LINC01547P58512 204 aaPredicted RBP4.49□□□□□ -1.69
LINC00254-201ENST00000563416 CD81P60033 236 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 KRTAP10-6P60371 365 aaPredicted RBP4.49□□□□□ -1.69
LINC00254-201ENST00000563416 FKBP3Q00688 224 aaKnown RBP4.49□□□□□ -1.69
LINC00254-201ENST00000563416 SMARCB1Q12824 385 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 RALGDSQ12967 914 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 NFE2L1Q14494 772 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 DUOXA1Q1HG43 343 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 RAB6CQ53S08 254 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 PPM1LQ5SGD2 360 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 LIN9Q5TKA1 542 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 WSCD1Q658N2 575 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 ALKBH5Q6P6C2 394 aaKnown RBP4.49□□□□□ -1.69
LINC00254-201ENST00000563416 PLXDC2Q6UX71 529 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 IQCHQ86VS3 1027 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 PDCL2Q8N4E4 241 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 RBM15BQ8NDT2 890 aaKnown RBP4.49□□□□□ -1.69
LINC00254-201ENST00000563416 SPPL2BQ8TCT7 592 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 C2orf15Q8WU43 125 aaKnown RBP4.49□□□□□ -1.69
LINC00254-201ENST00000563416 TAF4BQ92750 862 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 SYAP1Q96A49 352 aaPredicted RBP4.49□□□□□ -1.69
LINC00254-201ENST00000563416 HPDLQ96IR7 371 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 CABS1Q96KC9 395 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 TSG101Q99816 390 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 MGME1Q9BQP7 344 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 ACBD6Q9BR61 282 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 ACAT2Q9BWD1 397 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 RTN4RQ9BZR6 473 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 RAB6CQ9H0N0 254 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 ZBTB20Q9HC78 741 aaPredicted RBP4.49□□□□□ -1.69
LINC00254-201ENST00000563416 COQ3Q9NZJ6 369 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 CRNNQ9UBG3 495 aaPredicted RBP4.49□□□□□ -1.69
LINC00254-201ENST00000563416 MOSPD1Q9UJG1 213 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 ZNF148Q9UQR1 794 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 B3GALT5Q9Y2C3 310 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 COQ4Q9Y3A0 265 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 NME7Q9Y5B8 376 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 F5P12259 2224 aa4.49□□□□□ -1.69
LINC00254-201ENST00000563416 PLXND1Q9Y4D7 1925 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 CHD5Q8TDI0 1954 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 EDDM13A0A1B0GTR0 161 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 TMEM8BA6NDV4 472 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 OR6C76A6NM76 312 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 C2CD4DB7Z1M9 353 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 J3QR06 171 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 CCL16O15467 120 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 HCRTO43612 131 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 HLA-DRAP01903 254 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 LIPFP07098 398 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 TRIM49P0CI25 452 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 TRIM49CP0CI26 452 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 EPB41P11171 864 aaKnown RBP4.48□□□□□ -1.69
LINC00254-201ENST00000563416 KRT13P13646 458 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 P4HA1P13674 534 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 ATF6P18850 670 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 DCTP40126 519 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 ARPP19P56211 112 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 MYL6P60660 151 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 MYL7Q01449 175 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 INCA1Q0VD86 236 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 GAGE2BQ13066 116 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 PLD1Q13393 1074 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 TUBB2AQ13885 445 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 CAMK4Q16566 473 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 MEP1BQ16820 701 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 MRGPRG-AS1Q2M3A8 158 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 SGSM1Q2NKQ1 1148 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 ZNF699Q32M78 642 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 CFAP221Q4G0U5 840 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 GAGE2EQ4V326 116 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 SLC39A12Q504Y0 691 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 NDUFAF5Q5TEU4 345 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 DHRS7BQ6IAN0 325 aaPredicted RBP4.48□□□□□ -1.69
LINC00254-201ENST00000563416 GAGE2AQ6NT46 116 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 KLHDC8BQ8IXV7 354 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 LMNTD2Q8IXW0 634 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 MAML2Q8IZL2 1156 aaPredicted RBP4.48□□□□□ -1.69
LINC00254-201ENST00000563416 THEM5Q8N1Q8 247 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 ZNF619Q8N2I2 560 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 STPG4Q8N801 248 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 ATAD1Q8NBU5 361 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 LEMD2Q8NC56 503 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 CAMKVQ8NCB2 501 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 TAS1R2Q8TE23 839 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 TEKT4Q8WW24 435 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 NELFBQ8WX92 580 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 SMPDL3BQ92485 455 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 SLC35C1Q96A29 364 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 RPGRIP1Q96KN7 1286 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 DACH2Q96NX9 599 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 GFI1Q99684 422 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms