RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 WLSQ5T9L3 541 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 SULT1C3Q6IMI6 304 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 TRILQ7L0X0 811 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 ZBED8Q8IZ13 594 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 GOLM1Q8NBJ4 401 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 SRFBP1Q8NEF9 429 aaKnown RBP12.02□□□□□ -0.49
SF3B3-202ENST00000562722 MYRIPQ8NFW9 859 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 ESAMQ96AP7 390 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 MAPKAP1Q9BPZ7 522 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 TTYH2Q9BSA4 534 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 TBCDQ9BTW9 1192 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 LYRM4Q9HD34 91 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 TRMT1Q9NXH9 659 aaKnown RBP12.02□□□□□ -0.49
SF3B3-202ENST00000562722 TACC2O95359 2948 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 HIVEP1P15822 2718 aa12.02□□□□□ -0.49
SF3B3-202ENST00000562722 RTCAO00442 366 aaKnown RBP12.01□□□□□ -0.49
SF3B3-202ENST00000562722 AQP7O14520 342 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 PHGDHO43175 533 aaKnown RBP12.01□□□□□ -0.49
SF3B3-202ENST00000562722 WDR1O75083 606 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 SEC31AO94979 1220 aaKnown RBP12.01□□□□□ -0.49
SF3B3-202ENST00000562722 TBX6O95947 436 aaPredicted RBP12.01□□□□□ -0.49
SF3B3-202ENST00000562722 IGHG3P01860 377 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 CELA3AP09093 270 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 GLI4P10075 376 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 CCL3P10147 92 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 CPN2P22792 545 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 SSR2P43308 183 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 ZFP36L2P47974 494 aaKnown RBP12.01□□□□□ -0.49
SF3B3-202ENST00000562722 POU4F1Q01851 419 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 ASPHQ12797 758 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 CHIT1Q13231 466 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 SLC10A1Q14973 349 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 AP5B1Q2VPB7 878 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 C1orf185Q5T7R7 199 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 WDR53Q7Z5U6 358 aaPredicted RBP12.01□□□□□ -0.49
SF3B3-202ENST00000562722 ACOT4Q8N9L9 421 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 OR8K3Q8NH51 312 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 SLC22A8Q8TCC7 542 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 NRGNQ92686 78 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 CDKL2Q92772 493 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 SARAFQ96BY9 339 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 DGAT2Q96PD7 388 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 PHACTR1Q9C0D0 580 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 PRDM7Q9NQW5 492 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 TUBA8Q9NY65 449 aaPredicted RBP12.01□□□□□ -0.49
SF3B3-202ENST00000562722 MOCS1Q9NZB8 636 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 ZNF490Q9ULM2 529 aaPredicted RBP12.01□□□□□ -0.49
SF3B3-202ENST00000562722 RNF112Q9ULX5 631 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 MTO1Q9Y2Z2 717 aaKnown RBP12.01□□□□□ -0.49
SF3B3-202ENST00000562722 FAM215AQ9Y5M1 114 aa12.01□□□□□ -0.49
SF3B3-202ENST00000562722 TRGV5A0A0B4J1U4 118 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 A0A0G2JNJ9 132 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 EFCAB8A8MWE9 144 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 SAP18O00422 153 aaKnown RBP12□□□□□ -0.49
SF3B3-202ENST00000562722 PRAMEF4O60810 478 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 ETHE1O95571 254 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 CD1DP15813 335 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 STMN1P16949 149 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 CD22P20273 847 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 ATP5A1P25705 553 aaKnown RBP12□□□□□ -0.49
SF3B3-202ENST00000562722 DNAJA1P31689 397 aaKnown RBP12□□□□□ -0.49
SF3B3-202ENST00000562722 GGT5P36269 586 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 PIGAP37287 484 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 ATP6V0D1P61421 351 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 KCNJ2P63252 427 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 ILF2Q12905 390 aaKnown RBP12□□□□□ -0.49
SF3B3-202ENST00000562722 OR4D1Q15615 310 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 PRAMEF20Q5VT98 475 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 PRAMEF9Q5VWM5 478 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 ZNF793Q6ZN11 406 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 OR4N5Q8IXE1 308 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 UBE2E3Q969T4 207 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 JSRP1Q96MG2 331 aaPredicted RBP12□□□□□ -0.49
SF3B3-202ENST00000562722 CNPPD1Q9BV87 410 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 SEMA4BQ9NPR2 832 aaPredicted RBP12□□□□□ -0.49
SF3B3-202ENST00000562722 DNAJB12Q9NXW2 375 aaKnown RBP12□□□□□ -0.49
SF3B3-202ENST00000562722 Q9UFV3 132 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 BOKQ9UMX3 212 aaPredicted RBP12□□□□□ -0.49
SF3B3-202ENST00000562722 ATG4BQ9Y4P1 393 aa12□□□□□ -0.49
SF3B3-202ENST00000562722 SEC23IPQ9Y6Y8 1000 aaKnown RBP12□□□□□ -0.49
SF3B3-202ENST00000562722 A0A1B0GVC2 190 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 FAM47E-STBD1D6RA91 191 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 FGF17O60258 216 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 SUSD5O60279 629 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 HCN1O60741 890 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 ZNF354AO60765 605 aaPredicted RBP11.99□□□□□ -0.49
SF3B3-202ENST00000562722 TGFB1P01137 390 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 HIST1H1TP22492 207 aaPredicted RBP11.99□□□□□ -0.49
SF3B3-202ENST00000562722 STT3AP46977 705 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 RAP1GDS1P52306 607 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 PLIN5Q00G26 463 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 FOXO1Q12778 655 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 DDX39BQ13838 428 aaKnown RBP11.99□□□□□ -0.49
SF3B3-202ENST00000562722 MPEG1Q2M385 716 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 SLC25A35Q3KQZ1 300 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 TMEM35AQ53FP2 167 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 CDKL4Q5MAI5 379 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 SLC22A10Q63ZE4 541 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 RTL6Q6ICC9 239 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 MED27Q6P2C8 311 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms