RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 FNDC4Q9H6D8 234 aaPredicted RBP2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 MINDY3Q9H8M7 445 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 MOB1AQ9H8S9 216 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 RAB9BQ9NP90 201 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 PILRAQ9UKJ1 303 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 ITGA11Q9UKX5 1188 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 AUP1Q9Y679 476 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 POMT1Q9Y6A1 747 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 COL4A4P53420 1690 aaPredicted RBP2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 PPLO60437 1756 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 IQGAP3Q86VI3 1631 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 COL22A1Q8NFW1 1626 aaPredicted RBP2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 CDK12Q9NYV4 1490 aaPredicted RBP2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 ABCA3Q99758 1704 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 ERBINQ96RT1 1412 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 SETD5Q9C0A6 1442 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 PLCH1Q4KWH8 1693 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 CAMTA1Q9Y6Y1 1673 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 ILVBLA1L0T0 632 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 TRIM49BA6NDI0 452 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 YDJCA8MPS7 323 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 ARHGEF33A8MVX0 844 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 LMO7DNF2Z398 122 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 GALR3O60755 368 aaPredicted RBP2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 GRAP2O75791 330 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 ZFYP08048 801 aaPredicted RBP2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 ANKRD34CP0C6C1 535 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 DLATP10515 647 aaKnown RBP2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 SCG2P13521 617 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 FOLR2P14207 255 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 IFNAR1P17181 557 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 LMO2P25791 158 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 RPL9P32969 192 aaKnown RBP2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 ATP4BP51164 291 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 RIDAP52758 137 aaKnown RBP2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 NDUFV3P56181 108 aaKnown RBP2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 BTG1P62324 171 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 CNTN1Q12860 1018 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 ZNF770Q6IQ21 691 aaPredicted RBP2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 CAVIN1Q6NZI2 390 aaKnown RBP2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 CASC4Q6P4E1 433 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 TMUB2Q71RG4 321 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 TIPARPQ7Z3E1 657 aaKnown RBP2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 ANKRD46Q86W74 232 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 CARM1Q86X55 608 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 ZC3H3Q8IXZ2 948 aaKnown RBP2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 ELMOD1Q8N336 334 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 TMEM99Q8N816 258 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 DNASE1L2Q92874 299 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 HNRNPABQ99729 332 aaKnown RBP2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 ADNPQ9H2P0 1102 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 C5orf66Q9H5L9 145 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 IL1RAPQ9NPH3 570 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 GMEB2Q9UKD1 530 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 CELA1Q9UNI1 258 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 PCDHGA1Q9Y5H4 931 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 BCL9LQ86UU0 1499 aa2.45□□□□□ -2.02
HDGFL3-202ENST00000562702 NEXMIFQ5QGS0 1516 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 LRP5O75197 1615 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 TRGV8A0A0C4DH27 118 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 A8MU76 341 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 SRRM5B3KS81 715 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 KBTBD13C9JR72 458 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 IFIT3O14879 490 aaKnown RBP2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 MLNRO43193 412 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 ZNF749O43361 778 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 GPRIN2O60269 458 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 SELENOFO60613 162 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 HSPA4LO95757 839 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 ANGPTL1O95841 491 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 PTMAP06454 111 aaKnown RBP2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 CD1DP15813 335 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 CASTP20810 708 aaKnown RBP2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 SRD5A2P31213 254 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 IER3P46695 156 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 TSPY1Q01534 308 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 FOLH1Q04609 750 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 ABRQ12979 859 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 SIX1Q15475 284 aaPredicted RBP2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 KNOP1Q1ED39 458 aaKnown RBP2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 RFTN2Q52LD8 501 aaPredicted RBP2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 C17orf107Q6ZR85 190 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 RFPL4BQ6ZWI9 263 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 MCM10Q7L590 875 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 KCNMB4Q86W47 210 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 VSIG1Q86XK7 387 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 MARCH9Q86YJ5 346 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 KLHL7Q8IXQ5 586 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 SLC34A3Q8N130 599 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 Q8N7P7 452 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 C4orf32Q8N8J7 132 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 DEPDC1BQ8WUY9 529 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 SPATA17Q96L03 361 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 C1orf147Q96MC9 270 aaPredicted RBP2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 ATG101Q9BSB4 218 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 PINK1Q9BXM7 581 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 LRRCC1Q9C099 1032 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 LSG1Q9H089 658 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms