RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 CYP4F8P98187 520 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 PRKCZQ05513 592 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 CAMK2BQ13554 666 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 SLBPQ14493 270 aaKnown RBP eCLIP13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 DCST1Q5T197 706 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 C22orf42Q6IC83 251 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 ZNF770Q6IQ21 691 aaPredicted RBP13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 TMEM150AQ86TG1 271 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 VWA5B2Q8N398 1253 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 NANOGP1Q8N7R0 232 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 OR7G1Q8NGA0 311 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 C16orf78Q8WTQ4 265 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 FRMD6Q96NE9 622 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 ALPK3Q96L96 1907 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 ARRDC5A6NEK1 342 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 SGTAO43765 313 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 ALX3O95076 343 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 CKMP06732 381 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 KLK1P06870 262 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 SRPRAP08240 638 aaKnown RBP13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 ENDOUP21128 410 aaKnown RBP13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 CCL23P55773 120 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 RPS26P62854 115 aaKnown RBP13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 ASAH1Q13510 395 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 PUM1Q14671 1186 aaKnown RBP eCLIP13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 REEP3Q6NUK4 255 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 XKRXQ6PP77 449 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 SLCO4C1Q6ZQN7 724 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 Q6ZVL8 140 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 WDR53Q7Z5U6 358 aaPredicted RBP13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 PHC2Q8IXK0 858 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 CELF5Q8N6W0 485 aaKnown RBP13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 GALNT6Q8NCL4 622 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 ENKURQ8TC29 256 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 SLC25A46Q96AG3 418 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 FOPNLQ96NB1 174 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 MRPL9Q9BYD2 267 aaKnown RBP13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 PRRG3Q9BZD7 231 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 RACGAP1Q9H0H5 632 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 FZD3Q9NPG1 666 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 MIEF1Q9NQG6 463 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 TVP23BQ9NYZ1 205 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 REV1Q9UBZ9 1251 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 PPIL1Q9Y3C6 166 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 BACE2Q9Y5Z0 518 aa13.32□□□□□ -0.28
VPS9D1-202ENST00000561976 SLC35F4A4IF30 521 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 TPST2O60704 377 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 BCHEP06276 602 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 CSF3P09919 207 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 TNNI3P19429 210 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 SSTR4P31391 388 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 RPL3P39023 403 aaKnown RBP13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 MEF2AQ02078 507 aaPredicted RBP13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 PCDH1Q08174 1060 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 MLLT11Q13015 90 aaPredicted RBP13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 ILKQ13418 452 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 HEPACAMQ14CZ8 416 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 SEC23BQ15437 767 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 MPPE1Q53F39 396 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 CST9Q5W186 159 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 CEACAM20Q6UY09 585 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 DEF8Q6ZN54 512 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 LMNTD1Q8N9Z9 388 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 PROKR2Q8NFJ6 384 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 OR56A3Q8NH54 315 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 TRIM63Q969Q1 353 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 NLNQ9BYT8 704 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 POLR2J3Q9H1A7 115 aaKnown RBP13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 TXNL4BQ9NX01 149 aaKnown RBP13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 CFAP97Q9P2B7 532 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 NINQ8N4C6 2090 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 DSPPQ9NZW4 1301 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 B4DXG7 233 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 TNFRSF10AO00220 468 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 RECKO95980 971 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 QPRTQ15274 297 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 GLYR1Q49A26 553 aaPredicted RBP13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 PPP2R2DQ66LE6 453 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 TNFAIP8L2Q6P589 184 aaPredicted RBP13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 HSD11B1LQ7Z5J1 315 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 CHST14Q8NCH0 376 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 OR8J1Q8NGP2 316 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 GRPEL2Q8TAA5 225 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 FIBINQ8TAL6 211 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 RASSF5Q8WWW0 418 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 VOPP1Q96AW1 172 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 RNF170Q96K19 258 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 ZIC5Q96T25 663 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 NELL2Q99435 816 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 MIXL1Q9H2W2 232 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 RNF121Q9H920 327 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 ZNF334Q9HCZ1 680 aaPredicted RBP13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 MGAT4BQ9UQ53 548 aa13.31□□□□□ -0.28
VPS9D1-202ENST00000561976 CCDC88CQ9P219 2028 aa13.3□□□□□ -0.28
VPS9D1-202ENST00000561976 OR6C70A6NIJ9 312 aa13.3□□□□□ -0.28
VPS9D1-202ENST00000561976 TLX2O43763 284 aaPredicted RBP13.3□□□□□ -0.28
VPS9D1-202ENST00000561976 POP4O95707 220 aaKnown RBP13.3□□□□□ -0.28
VPS9D1-202ENST00000561976 CHRNB1P11230 501 aa13.3□□□□□ -0.28
VPS9D1-202ENST00000561976 ITGB7P26010 798 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms