RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 TINAGQ9UJW2 476 aa23.52■■□□□ 1.36
NME3-202ENST00000561637 MRPS33Q9Y291 106 aaKnown RBP23.52■■□□□ 1.36
NME3-202ENST00000561637 ANGPTL3Q9Y5C1 460 aa23.52■■□□□ 1.36
NME3-202ENST00000561637 SYCE1LA8MT33 242 aa23.51■■□□□ 1.35
NME3-202ENST00000561637 ITGA10O75578 1167 aa23.51■■□□□ 1.35
NME3-202ENST00000561637 SCELO95171 688 aa23.51■■□□□ 1.35
NME3-202ENST00000561637 ETHE1O95571 254 aa23.51■■□□□ 1.35
NME3-202ENST00000561637 PHBP35232 272 aa23.51■■□□□ 1.35
NME3-202ENST00000561637 MAGEA12P43365 314 aa23.51■■□□□ 1.35
NME3-202ENST00000561637 RPS13P62277 151 aaKnown RBP23.51■■□□□ 1.35
NME3-202ENST00000561637 ADORA2A-AS1P86434 159 aa23.51■■□□□ 1.35
NME3-202ENST00000561637 TGM3Q08188 693 aa23.51■■□□□ 1.35
NME3-202ENST00000561637 CDSNQ15517 529 aa23.51■■□□□ 1.35
NME3-202ENST00000561637 DEPDC1Q5TB30 811 aa23.51■■□□□ 1.35
NME3-202ENST00000561637 NCCRP1Q6ZVX7 275 aaPredicted RBP23.51■■□□□ 1.35
NME3-202ENST00000561637 MDGA2Q7Z553 956 aa23.51■■□□□ 1.35
NME3-202ENST00000561637 CHERPQ8IWX8 916 aaKnown RBP23.51■■□□□ 1.35
NME3-202ENST00000561637 PAFAH2Q99487 392 aa23.51■■□□□ 1.35
NME3-202ENST00000561637 FMO2Q99518 471 aa23.51■■□□□ 1.35
NME3-202ENST00000561637 RNF11Q9Y3C5 154 aa23.51■■□□□ 1.35
NME3-202ENST00000561637 WASHC1A8K0Z3 465 aa23.5■■□□□ 1.35
NME3-202ENST00000561637 PLPP1O14494 284 aa23.5■■□□□ 1.35
NME3-202ENST00000561637 FGF17O60258 216 aa23.5■■□□□ 1.35
NME3-202ENST00000561637 SLC19A2O60779 497 aa23.5■■□□□ 1.35
NME3-202ENST00000561637 HPDP32754 393 aaPredicted RBP23.5■■□□□ 1.35
NME3-202ENST00000561637 NR0B1P51843 470 aaKnown RBP23.5■■□□□ 1.35
NME3-202ENST00000561637 ALDH18A1P54886 795 aaKnown RBP23.5■■□□□ 1.35
NME3-202ENST00000561637 GTF2H2Q13888 395 aa23.5■■□□□ 1.35
NME3-202ENST00000561637 ELAVL1Q15717 326 aaKnown RBP23.5■■□□□ 1.35
NME3-202ENST00000561637 AP5B1Q2VPB7 878 aa23.5■■□□□ 1.35
NME3-202ENST00000561637 TMEM35AQ53FP2 167 aa23.5■■□□□ 1.35
NME3-202ENST00000561637 GTF2H2CQ6P1K8 395 aa23.5■■□□□ 1.35
NME3-202ENST00000561637 RPTNQ6XPR3 784 aa23.5■■□□□ 1.35
NME3-202ENST00000561637 DGAT2L6Q6ZPD8 337 aa23.5■■□□□ 1.35
NME3-202ENST00000561637 HORMAD2Q8N7B1 307 aa23.5■■□□□ 1.35
NME3-202ENST00000561637 PTGR2Q8N8N7 351 aaPredicted RBP23.5■■□□□ 1.35
NME3-202ENST00000561637 UBE2E3Q969T4 207 aa23.5■■□□□ 1.35
NME3-202ENST00000561637 CMTM7Q96FZ5 175 aa23.5■■□□□ 1.35
NME3-202ENST00000561637 NSUN5Q96P11 429 aaKnown RBP23.5■■□□□ 1.35
NME3-202ENST00000561637 CDK15Q96Q40 435 aa23.5■■□□□ 1.35
NME3-202ENST00000561637 ZNF717Q9BY31 904 aaPredicted RBP23.5■■□□□ 1.35
NME3-202ENST00000561637 OR8D2Q9GZM6 311 aa23.5■■□□□ 1.35
NME3-202ENST00000561637 ACTR8Q9H981 624 aa23.5■■□□□ 1.35
NME3-202ENST00000561637 FCHO1O14526 889 aa23.49■■□□□ 1.35
NME3-202ENST00000561637 ZNF354AO60765 605 aaPredicted RBP23.49■■□□□ 1.35
NME3-202ENST00000561637 EEDO75530 441 aaKnown RBP23.49■■□□□ 1.35
NME3-202ENST00000561637 CPN2P22792 545 aa23.49■■□□□ 1.35
NME3-202ENST00000561637 MEOX1P50221 254 aa23.49■■□□□ 1.35
NME3-202ENST00000561637 NEK2P51955 445 aa23.49■■□□□ 1.35
NME3-202ENST00000561637 HNRNPH2P55795 449 aaKnown RBP23.49■■□□□ 1.35
NME3-202ENST00000561637 GPR85P60893 370 aa23.49■■□□□ 1.35
NME3-202ENST00000561637 STX4Q12846 297 aa23.49■■□□□ 1.35
NME3-202ENST00000561637 SLAMF1Q13291 335 aa23.49■■□□□ 1.35
NME3-202ENST00000561637 PCBP2Q15366 365 aaKnown RBP eCLIP23.49■■□□□ 1.35
NME3-202ENST00000561637 CPSF6Q16630 551 aaKnown RBP eCLIP23.49■■□□□ 1.35
NME3-202ENST00000561637 C18orf63Q68DL7 685 aa23.49■■□□□ 1.35
NME3-202ENST00000561637 OR4C11Q6IEV9 310 aa23.49■■□□□ 1.35
NME3-202ENST00000561637 SPNS3Q6ZMD2 512 aa23.49■■□□□ 1.35
NME3-202ENST00000561637 RPS27LQ71UM5 84 aaKnown RBP23.49■■□□□ 1.35
NME3-202ENST00000561637 FGD2Q7Z6J4 655 aa23.49■■□□□ 1.35
NME3-202ENST00000561637 CYP4Z2PQ8N1L4 340 aa23.49■■□□□ 1.35
NME3-202ENST00000561637 DCAKDQ8WVC6 231 aa23.49■■□□□ 1.35
NME3-202ENST00000561637 UCN3Q969E3 161 aa23.49■■□□□ 1.35
NME3-202ENST00000561637 ISL2Q96A47 359 aa23.49■■□□□ 1.35
NME3-202ENST00000561637 IPPKQ9H8X2 491 aa23.49■■□□□ 1.35
NME3-202ENST00000561637 VTI1BQ9UEU0 232 aa23.49■■□□□ 1.35
NME3-202ENST00000561637 GTF3C1Q12789 2109 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 A0A0G2JMM0 328 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 A0A1W2PPB8 328 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 A0A1W2PRS3 328 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 KIR3DP1A8MWS1 328 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 C17orf105B2RV13 164 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 POC1B-GALNT4F8VUJ3 575 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 WWP2O00308 870 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 OR7A17O14581 309 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 OR2J2O76002 312 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 INHBAP08476 426 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 CTAGE8P0CG41 777 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 PTGER1P34995 402 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 CHSY3Q70JA7 882 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 CCDC91Q7Z6B0 441 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 SULF2Q8IWU5 870 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 CTAGE4Q8IX94 777 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 TMEM156Q8N614 296 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 SRFBP1Q8NEF9 429 aaKnown RBP23.48■■□□□ 1.35
NME3-202ENST00000561637 OR52B6Q8NGF0 335 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 PHF21BQ96EK2 531 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 ROGDIQ9GZN7 287 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 DEPPQ9NTK1 212 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 XPR1Q9UBH6 696 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 ATG4BQ9Y4P1 393 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 CLCA3PQ9Y6N3 262 aa23.48■■□□□ 1.35
NME3-202ENST00000561637 HRKO00198 91 aa23.47■■□□□ 1.35
NME3-202ENST00000561637 TMPRSS11DO60235 418 aa23.47■■□□□ 1.35
NME3-202ENST00000561637 DIAPH2O60879 1101 aa23.47■■□□□ 1.35
NME3-202ENST00000561637 ZFAND5O76080 213 aa23.47■■□□□ 1.35
NME3-202ENST00000561637 OR6B1O95007 311 aa23.47■■□□□ 1.35
NME3-202ENST00000561637 ZNF24P17028 368 aa23.47■■□□□ 1.35
NME3-202ENST00000561637 KIR3DL1P43629 444 aa23.47■■□□□ 1.35
NME3-202ENST00000561637 RAP1GDS1P52306 607 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms