RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 DLX5P56178 289 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 NLRP11P59045 1033 aaKnown RBP3.36□□□□□ -1.87
HERC1-215ENST00000561436 CDR2Q01850 454 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 ARL16Q0P5N6 197 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 ILF3Q12906 894 aaKnown RBP eCLIP3.36□□□□□ -1.87
HERC1-215ENST00000561436 TRAP1Q12931 704 aaKnown RBP3.36□□□□□ -1.87
HERC1-215ENST00000561436 TAF10Q12962 218 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 HTR4Q13639 388 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 MORF4L2Q15014 288 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 RBBP5Q15291 538 aaKnown RBP3.36□□□□□ -1.87
HERC1-215ENST00000561436 MLF2Q15773 248 aaPredicted RBP3.36□□□□□ -1.87
HERC1-215ENST00000561436 UGP2Q16851 508 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 TYSND1Q2T9J0 566 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 SMU1Q2TAY7 513 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 ZC2HC1CQ53FD0 456 aaPredicted RBP3.36□□□□□ -1.87
HERC1-215ENST00000561436 XKR3Q5GH77 459 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 WDR38Q5JTN6 314 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 CLLU1OSQ5K130 101 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 SPDYCQ5MJ68 293 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 LYSMD4Q5XG99 296 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 FUT10Q6P4F1 479 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 CASC1Q6TDU7 716 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 RBMS3Q6XE24 437 aaKnown RBP3.36□□□□□ -1.87
HERC1-215ENST00000561436 TMEM182Q6ZP80 229 aaPredicted RBP3.36□□□□□ -1.87
HERC1-215ENST00000561436 ZNF329Q86UD4 541 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 CLYBLQ8N0X4 340 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 METTL13Q8N6R0 699 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 ZNF383Q8NA42 475 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 LEMD2Q8NC56 503 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 MSANTD4Q8NCY6 345 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 PSMA8Q8TAA3 256 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 LRRC8CQ8TDW0 803 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 RIT1Q92963 219 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 ST6GALNAC6Q969X2 333 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 ALG14Q96F25 216 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 CCDC43Q96MW1 224 aaKnown RBP3.36□□□□□ -1.87
HERC1-215ENST00000561436 MBOAT7Q96N66 472 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 GPATCH1Q9BRR8 931 aaKnown RBP3.36□□□□□ -1.87
HERC1-215ENST00000561436 NT5C3AQ9H0P0 336 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 SDCBP2Q9H190 292 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 MMADHCQ9H3L0 296 aaPredicted RBP3.36□□□□□ -1.87
HERC1-215ENST00000561436 ACTL8Q9H568 366 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 PELI2Q9HAT8 420 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 TUFT1Q9NNX1 390 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 TBC1D13Q9NVG8 400 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 P4HTMQ9NXG6 502 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 TCF19Q9Y242 345 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 CACNA1BQ00975 2339 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 IGLV9-49A0A0B4J1Y8 123 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 IGHV4-61A0A0C4DH41 118 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 A0A1W2PPK0 400 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 CCDC69A6NI79 296 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 SMIM1B2RUZ4 78 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 TMEM150CB9EJG8 249 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 ZNF197O14709 1029 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 KLF11O14901 512 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 ZNF263O14978 683 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 FCGR3BO75015 233 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 DFFBO76075 338 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 CCNE2O96020 404 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 TSHBP01222 138 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 IGHV4-59P01825 116 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 APOHP02749 345 aaPredicted RBP3.35□□□□□ -1.87
HERC1-215ENST00000561436 PROS1P07225 676 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 C8orf89P0DMQ9 161 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 PRKAR1AP10644 381 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 TCF4P15884 667 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 SFTPDP35247 375 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 DCTP40126 519 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 CDX1P47902 265 aaPredicted RBP3.35□□□□□ -1.87
HERC1-215ENST00000561436 SLC11A1P49279 550 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 GSDMDP57764 484 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 STX1BP61266 288 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 MYL7Q01449 175 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 SP4Q02446 784 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 CSTF1Q05048 431 aaKnown RBP3.35□□□□□ -1.87
HERC1-215ENST00000561436 IL10RBQ08334 325 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 ITGB3BPQ13352 177 aaPredicted RBP3.35□□□□□ -1.87
HERC1-215ENST00000561436 MXD4Q14582 209 aaPredicted RBP3.35□□□□□ -1.87
HERC1-215ENST00000561436 FUT11Q495W5 492 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 TWF2Q6IBS0 349 aaKnown RBP3.35□□□□□ -1.87
HERC1-215ENST00000561436 CWC27Q6UX04 472 aaKnown RBP3.35□□□□□ -1.87
HERC1-215ENST00000561436 LINC00696Q6ZRV3 163 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 SH2D5Q6ZV89 423 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 PIWIL3Q7Z3Z3 882 aaKnown RBP3.35□□□□□ -1.87
HERC1-215ENST00000561436 TRPT1Q86TN4 253 aaKnown RBP3.35□□□□□ -1.87
HERC1-215ENST00000561436 CUZD1Q86UP6 607 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 PLA2G4DQ86XP0 818 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 DCUN1D3Q8IWE4 304 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 SYCP3Q8IZU3 236 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 SPEM1Q8N4L4 309 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 MARVELD2Q8N4S9 558 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 OR7G3Q8NG95 312 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 OR10V1Q8NGI7 309 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 OR10Q1Q8NGQ4 319 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 CCDC26Q8TAB7 109 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 OCC1Q8TAD7 63 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 TCP11Q8WWU5 503 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 METTL21AQ8WXB1 218 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms