RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 TUBB6Q9BUF5 446 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 ING2Q9H160 280 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 ADNPQ9H2P0 1102 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 RPF2Q9H7B2 306 aaKnown RBP9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 ZNF395Q9H8N7 513 aaPredicted RBP9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 MED4Q9NPJ6 270 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 ATP13A2Q9NQ11 1180 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 PFDN4Q9NQP4 134 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 NECTIN3Q9NQS3 549 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 PRTFDC1Q9NRG1 225 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 C1orf109Q9NX04 203 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 VTI1BQ9UEU0 232 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 FBXL4Q9UKA2 621 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 PPIEQ9UNP9 301 aaKnown RBP9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 COL6A6A6NMZ7 2263 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 EXPH5Q8NEV8 1989 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 SMG1Q96Q15 3661 aaKnown RBP9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 ARHGAP10A1A4S6 786 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 C1orf226A1L170 272 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 TMEM233B4DJY2 109 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 TGFBR3LH3BV60 316 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 DYNC1I1O14576 645 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 PIP5K1BO14986 540 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 LSM1O15116 133 aaKnown RBP9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 KLHL41O60662 606 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 CDC123O75794 336 aaPredicted RBP9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 ATXN8OSP0DMR3 200 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 MAOAP21397 527 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 PPP2R1BP30154 601 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 GALNSP34059 522 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 MAPK12P53778 367 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 SERTAD2Q14140 314 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 IMPG1Q17R60 797 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 SMU1Q2TAY7 513 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 SPDYAQ5MJ70 313 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 MFSD4BQ5TF39 518 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 C18orf63Q68DL7 685 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 PLAG1Q6DJT9 500 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 PCSK4Q6UW60 755 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 RIPOR1Q6ZS17 1223 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 RGS9BPQ6ZS82 235 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 LANCL3Q6ZV70 420 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 EFCAB3Q8N7B9 438 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 ZNF781Q8N8C0 355 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 FAM47BQ8NA70 645 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 DNAJB14Q8TBM8 379 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 MGARPQ8TDB4 240 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 TSLPQ969D9 159 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 UBL7Q96S82 380 aaPredicted RBP9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 MESP1Q9BRJ9 268 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 WDR41Q9HAD4 459 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 PRM3Q9NNZ6 103 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 INTS9Q9NV88 658 aaKnown RBP9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 RIC8BQ9NVN3 520 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 FBXW2Q9UKT8 454 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 CES1P1Q9UKY3 287 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 LHX6Q9UPM6 363 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 TMED5Q9Y3A6 229 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 PCDHGA9Q9Y5G4 932 aaKnown RBP9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 PCDHA9Q9Y5H5 950 aa9.03□□□□□ -0.96
RABGGTA-221ENST00000561055 IGSF10Q6WRI0 2623 aa9.02□□□□□ -0.96
RABGGTA-221ENST00000561055 NSG1A0A0A6YYJ2 146 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 ARGFXA6NJG6 315 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 SLCO1B7G3V0H7 640 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 PGRMC2O15173 223 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 PCDH7O60245 1069 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 SEC22BO75396 215 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 GPR75O95800 540 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 AIFM1O95831 613 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 GBAP04062 536 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 LINC00032P0C843 101 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 PRR35P0CG20 571 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 NR2F6P10588 404 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 SFTPCP11686 197 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 DRD2P14416 443 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 NR1D1P20393 614 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 HK2P52789 917 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 POLE2P56282 527 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 OR4D2P58180 307 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 AP2B1P63010 937 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 ZNF763Q0D2J5 394 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 Q0VFX4 171 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 SLC13A2Q13183 592 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 EXT1Q16394 746 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 RFTN2Q52LD8 501 aaPredicted RBP9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 SFT2D3Q587I9 215 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 NDUFAF5Q5TEU4 345 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 CPZQ66K79 652 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 FAAH2Q6GMR7 532 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 OR52E8Q6IFG1 317 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 NOXRED1Q6NXP6 359 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 H3F3CQ6NXT2 135 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 JMJD6Q6NYC1 403 aaPredicted RBP9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 CLEC1AQ8NC01 280 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 NFAM1Q8NET5 270 aaPredicted RBP9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 C16orf78Q8WTQ4 265 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 CKAP2Q8WWK9 683 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 EXTL1Q92935 676 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 C8orf44Q96CB5 159 aa9.02□□□□□ -0.97
RABGGTA-221ENST00000561055 ZNF764Q96H86 408 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms