RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 KIR3DL1P43629 444 aa15.05■□□□□ -0
SNX1-213ENST00000561026 HK2P52789 917 aa15.05■□□□□ -0
SNX1-213ENST00000561026 NAB1Q13506 487 aa15.05■□□□□ -0
SNX1-213ENST00000561026 ARHGAP11AQ6P4F7 1023 aa15.05■□□□□ -0
SNX1-213ENST00000561026 IL20RBQ6UXL0 311 aa15.05■□□□□ -0
SNX1-213ENST00000561026 ZNF295-AS1Q8N0V1 137 aa15.05■□□□□ -0
SNX1-213ENST00000561026 ZNF321PQ8N8H1 164 aa15.05■□□□□ -0
SNX1-213ENST00000561026 C7orf57Q8NEG2 295 aa15.05■□□□□ -0
SNX1-213ENST00000561026 SLC2A12Q8TD20 617 aa15.05■□□□□ -0
SNX1-213ENST00000561026 ANKRD9Q96BM1 317 aaPredicted RBP15.05■□□□□ -0
SNX1-213ENST00000561026 NXNL1Q96CM4 212 aa15.05■□□□□ -0
SNX1-213ENST00000561026 CMTM7Q96FZ5 175 aa15.05■□□□□ -0
SNX1-213ENST00000561026 PRM3Q9NNZ6 103 aa15.05■□□□□ -0
SNX1-213ENST00000561026 ACOT9Q9Y305 439 aa15.05■□□□□ -0
SNX1-213ENST00000561026 HRH3Q9Y5N1 445 aa15.05■□□□□ -0
SNX1-213ENST00000561026 CACNA1CQ13936 2221 aa15.05■□□□□ -0
SNX1-213ENST00000561026 PINLYPA6NC86 204 aa15.04■□□□□ -0
SNX1-213ENST00000561026 SAP18O00422 153 aaKnown RBP15.04■□□□□ -0
SNX1-213ENST00000561026 SH3BGRLO75368 114 aa15.04■□□□□ -0
SNX1-213ENST00000561026 PDE9AO76083 593 aa15.04■□□□□ -0
SNX1-213ENST00000561026 TPOP07202 933 aa15.04■□□□□ -0
SNX1-213ENST00000561026 MTHFD2P13995 350 aa15.04■□□□□ -0
SNX1-213ENST00000561026 EPB42P16452 691 aa15.04■□□□□ -0
SNX1-213ENST00000561026 RNF4P78317 190 aa15.04■□□□□ -0
SNX1-213ENST00000561026 ID2Q02363 134 aa15.04■□□□□ -0
SNX1-213ENST00000561026 GUCY2DQ02846 1103 aa15.04■□□□□ -0
SNX1-213ENST00000561026 DEPDC1Q5TB30 811 aa15.04■□□□□ -0
SNX1-213ENST00000561026 KHDRBS2Q5VWX1 349 aaKnown RBP15.04■□□□□ -0
SNX1-213ENST00000561026 CD163Q86VB7 1156 aa15.04■□□□□ -0
SNX1-213ENST00000561026 OR2M7Q8NG81 312 aa15.04■□□□□ -0
SNX1-213ENST00000561026 OR5L2Q8NGL0 311 aa15.04■□□□□ -0
SNX1-213ENST00000561026 SREK1Q8WXA9 508 aaKnown RBP15.04■□□□□ -0
SNX1-213ENST00000561026 SDCCAG3Q96C92 435 aa15.04■□□□□ -0
SNX1-213ENST00000561026 DEFB127Q9H1M4 99 aa15.04■□□□□ -0
SNX1-213ENST00000561026 OR51B5Q9H339 312 aa15.04■□□□□ -0
SNX1-213ENST00000561026 ADGRE2Q9UHX3 823 aa15.04■□□□□ -0
SNX1-213ENST00000561026 SYCE1LA8MT33 242 aa15.03■□□□□ -0
SNX1-213ENST00000561026 ETHE1O95571 254 aa15.03■□□□□ -0
SNX1-213ENST00000561026 CPN2P22792 545 aa15.03■□□□□ -0
SNX1-213ENST00000561026 SSR2P43308 183 aa15.03■□□□□ -0
SNX1-213ENST00000561026 ETF1P62495 437 aaKnown RBP15.03■□□□□ -0
SNX1-213ENST00000561026 PPIAP62937 165 aaKnown RBP15.03■□□□□ -0
SNX1-213ENST00000561026 IGLV3-21P80748 117 aaPredicted RBP15.03■□□□□ -0
SNX1-213ENST00000561026 SLAMF1Q13291 335 aa15.03■□□□□ -0
SNX1-213ENST00000561026 OR4C11Q6IEV9 310 aa15.03■□□□□ -0
SNX1-213ENST00000561026 GRHL2Q6ISB3 625 aa15.03■□□□□ -0
SNX1-213ENST00000561026 RGS9BPQ6ZS82 235 aa15.03■□□□□ -0
SNX1-213ENST00000561026 CCDC91Q7Z6B0 441 aa15.03■□□□□ -0
SNX1-213ENST00000561026 CENPLQ8N0S6 344 aaPredicted RBP15.03■□□□□ -0
SNX1-213ENST00000561026 HUS1BQ8NHY5 278 aa15.03■□□□□ -0
SNX1-213ENST00000561026 RHEBL1Q8TAI7 183 aa15.03■□□□□ -0
SNX1-213ENST00000561026 ZNF721Q8TF20 911 aa15.03■□□□□ -0
SNX1-213ENST00000561026 CA5BP1Q8WTZ4 195 aa15.03■□□□□ -0
SNX1-213ENST00000561026 KCTD4Q8WVF5 259 aa15.03■□□□□ -0
SNX1-213ENST00000561026 SCYL1Q96KG9 808 aa15.03■□□□□ -0
SNX1-213ENST00000561026 SGCZQ96LD1 299 aa15.03■□□□□ -0
SNX1-213ENST00000561026 SPOCK3Q9BQ16 436 aa15.03■□□□□ -0
SNX1-213ENST00000561026 COQ3Q9NZJ6 369 aa15.03■□□□□ -0
SNX1-213ENST00000561026 A0A0G2JMM0 328 aa15.02■□□□□ -0
SNX1-213ENST00000561026 A0A1W2PPB8 328 aa15.02■□□□□ -0
SNX1-213ENST00000561026 A0A1W2PRS3 328 aa15.02■□□□□ -0
SNX1-213ENST00000561026 CCDC189A1A4V9 331 aa15.02■□□□□ -0
SNX1-213ENST00000561026 HMX2A2RU54 273 aa15.02■□□□□ -0
SNX1-213ENST00000561026 KIR3DP1A8MWS1 328 aa15.02■□□□□ -0
SNX1-213ENST00000561026 FGF17O60258 216 aa15.02■□□□□ -0
SNX1-213ENST00000561026 ZNF354AO60765 605 aaPredicted RBP15.02■□□□□ -0
SNX1-213ENST00000561026 COX7A2P14406 83 aa15.02■□□□□ -0
SNX1-213ENST00000561026 CNR1P21554 472 aa15.02■□□□□ -0
SNX1-213ENST00000561026 PIK3CBP42338 1070 aa15.02■□□□□ -0
SNX1-213ENST00000561026 NR0B1P51843 470 aaKnown RBP15.02■□□□□ -0
SNX1-213ENST00000561026 PLGLB1Q02325 96 aa15.02■□□□□ -0
SNX1-213ENST00000561026 FAM83EQ2M2I3 478 aa15.02■□□□□ -0
SNX1-213ENST00000561026 ZNF750Q32MQ0 723 aa15.02■□□□□ -0
SNX1-213ENST00000561026 MROH9Q5TGP6 573 aa15.02■□□□□ -0
SNX1-213ENST00000561026 PAOXQ6QHF9 649 aa15.02■□□□□ -0
SNX1-213ENST00000561026 RTL4Q6ZR62 310 aa15.02■□□□□ -0
SNX1-213ENST00000561026 OR4N5Q8IXE1 308 aa15.02■□□□□ -0
SNX1-213ENST00000561026 RNF175Q8N4F7 328 aa15.02■□□□□ -0
SNX1-213ENST00000561026 MARVELD2Q8N4S9 558 aa15.02■□□□□ -0
SNX1-213ENST00000561026 TEX9Q8N6V9 391 aa15.02■□□□□ -0
SNX1-213ENST00000561026 GOLM1Q8NBJ4 401 aa15.02■□□□□ -0
SNX1-213ENST00000561026 RGMAQ96B86 450 aa15.02■□□□□ -0
SNX1-213ENST00000561026 SENP5Q96HI0 755 aaPredicted RBP15.02■□□□□ -0
SNX1-213ENST00000561026 LURAP1Q96LR2 239 aa15.02■□□□□ -0
SNX1-213ENST00000561026 SORBS1Q9BX66 1292 aaKnown RBP15.02■□□□□ -0
SNX1-213ENST00000561026 RPF2Q9H7B2 306 aaKnown RBP15.02■□□□□ -0
SNX1-213ENST00000561026 ZDHHC11Q9H8X9 412 aa15.02■□□□□ -0
SNX1-213ENST00000561026 MS4A12Q9NXJ0 267 aa15.02■□□□□ -0
SNX1-213ENST00000561026 COPS7AQ9UBW8 275 aa15.02■□□□□ -0
SNX1-213ENST00000561026 TSC22D4Q9Y3Q8 395 aa15.02■□□□□ -0
SNX1-213ENST00000561026 POLQO75417 2590 aa15.02□□□□□ -0.01
SNX1-213ENST00000561026 ZNF407Q9C0G0 2248 aa15.02□□□□□ -0.01
SNX1-213ENST00000561026 A0A087X1B8 175 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 FAM166BA8MTA8 275 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 ACOT7O00154 380 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 GLSO94925 669 aaPredicted RBP15.01□□□□□ -0.01
SNX1-213ENST00000561026 C2P06681 752 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 SSTR2P30874 369 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 STT3AP46977 705 aa15.01□□□□□ -0.01
SNX1-213ENST00000561026 RAP1GDS1P52306 607 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms