RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 ZNF655Q8N720 491 aaPredicted RBP12.21□□□□□ -0.45
SNX1-211ENST00000560829 KLHL6Q8WZ60 621 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 MAL2Q969L2 176 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 RERGQ96A58 199 aaPredicted RBP12.21□□□□□ -0.45
SNX1-211ENST00000560829 TRAPPC9Q96Q05 1148 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 MAPKAP1Q9BPZ7 522 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 KLHL25Q9H0H3 589 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 ERVMER34-1Q9H9K5 563 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 IL1RAPQ9NPH3 570 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 KCMF1Q9P0J7 381 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 FBXW2Q9UKT8 454 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 MAP4K5Q9Y4K4 846 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 SNX11Q9Y5W9 270 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 DNAH14Q0VDD8 3507 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 PDLIM1O00151 329 aa12.21□□□□□ -0.46
SNX1-211ENST00000560829 TXNDC9O14530 226 aa12.21□□□□□ -0.46
SNX1-211ENST00000560829 PRAMEF10O60809 474 aa12.21□□□□□ -0.46
SNX1-211ENST00000560829 B4GALT2O60909 372 aa12.21□□□□□ -0.46
SNX1-211ENST00000560829 PRKRAO75569 313 aaKnown RBP12.21□□□□□ -0.46
SNX1-211ENST00000560829 PIAS2O75928 621 aa12.21□□□□□ -0.46
SNX1-211ENST00000560829 CST1P01037 141 aa12.21□□□□□ -0.46
SNX1-211ENST00000560829 TYRP1P17643 537 aa12.21□□□□□ -0.46
SNX1-211ENST00000560829 PRIM2P49643 509 aa12.21□□□□□ -0.46
SNX1-211ENST00000560829 CSNK1EP49674 416 aaKnown RBP12.21□□□□□ -0.46
SNX1-211ENST00000560829 PCBP3P57721 371 aaKnown RBP12.21□□□□□ -0.46
SNX1-211ENST00000560829 SNRPNP63162 240 aaKnown RBP12.21□□□□□ -0.46
SNX1-211ENST00000560829 HSPB3Q12988 150 aa12.21□□□□□ -0.46
SNX1-211ENST00000560829 SCARB2Q14108 478 aa12.21□□□□□ -0.46
SNX1-211ENST00000560829 PDK3Q15120 406 aa12.21□□□□□ -0.46
SNX1-211ENST00000560829 CWF19L1Q69YN2 538 aaKnown RBP12.21□□□□□ -0.46
SNX1-211ENST00000560829 TMEM214Q6NUQ4 689 aaKnown RBP12.21□□□□□ -0.46
SNX1-211ENST00000560829 SUN3Q8TAQ9 357 aa12.21□□□□□ -0.46
SNX1-211ENST00000560829 CNRIP1Q96F85 164 aaPredicted RBP12.21□□□□□ -0.46
SNX1-211ENST00000560829 VPS50Q96JG6 964 aa12.21□□□□□ -0.46
SNX1-211ENST00000560829 C10orf90Q96M02 699 aa12.21□□□□□ -0.46
SNX1-211ENST00000560829 PHF11Q9UIL8 331 aa12.21□□□□□ -0.46
SNX1-211ENST00000560829 SNX8Q9Y5X2 465 aa12.21□□□□□ -0.46
SNX1-211ENST00000560829 FANCMQ8IYD8 2048 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 HEATR5BQ9P2D3 2071 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 TMEM229AB2RXF0 380 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 EI24O14681 340 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 ZNF682O95780 498 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 LYNP07948 512 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 NR2F6P10588 404 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 ST6GAL1P15907 406 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 ZNF23P17027 643 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 ALOX12P18054 663 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 CCT3P49368 545 aaKnown RBP12.2□□□□□ -0.46
SNX1-211ENST00000560829 CLCN2P51788 898 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 C21orf59P57076 290 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 DSTNP60981 165 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 TXNL4AP83876 142 aaKnown RBP12.2□□□□□ -0.46
SNX1-211ENST00000560829 ZXDAP98168 799 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 CDK6Q00534 326 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 TNFRSF17Q02223 184 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 BIRC2Q13490 618 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 MYBPC3Q14896 1274 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 CRB2Q5IJ48 1285 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 C6orf52Q5T4I8 152 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 DGLUCYQ7Z3D6 616 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 PIWIL3Q7Z3Z3 882 aaKnown RBP12.2□□□□□ -0.46
SNX1-211ENST00000560829 C6orf120Q7Z4R8 191 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 ZDHHC21Q8IVQ6 265 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 CHERPQ8IWX8 916 aaKnown RBP12.2□□□□□ -0.46
SNX1-211ENST00000560829 SVOPLQ8N434 492 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 C19orf47Q8N9M1 422 aaKnown RBP12.2□□□□□ -0.46
SNX1-211ENST00000560829 SFXN5Q8TD22 340 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 TMBIM1Q969X1 311 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 ZNF681Q96N22 645 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 BBS4Q96RK4 519 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 TMEM121BQ9BXQ6 578 aaPredicted RBP12.2□□□□□ -0.46
SNX1-211ENST00000560829 LYRM4Q9HD34 91 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 A4GALTQ9NPC4 353 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 DNAAF2Q9NVR5 837 aaKnown RBP12.2□□□□□ -0.46
SNX1-211ENST00000560829 ADPRHL2Q9NX46 363 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 MS4A12Q9NXJ0 267 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 PSME2Q9UL46 239 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 DAPP1Q9UN19 280 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 ENTPD4Q9Y227 616 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 SLC22A7Q9Y694 548 aa12.2□□□□□ -0.46
SNX1-211ENST00000560829 GLOD5A6NK44 160 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 WASHC1A8K0Z3 465 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 B3GALT2O43825 422 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 SH3BP5O60239 455 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 DPM1O60762 260 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 PROS1P07225 676 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 TDGF1P13385 188 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 CSNK2A2P19784 350 aaPredicted RBP12.19□□□□□ -0.46
SNX1-211ENST00000560829 BUD31P41223 144 aaPredicted RBP12.19□□□□□ -0.46
SNX1-211ENST00000560829 NCBP2P52298 156 aaKnown RBP eCLIP12.19□□□□□ -0.46
SNX1-211ENST00000560829 EPHA4P54764 986 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 RUNX2Q13950 521 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 DEFB134Q4QY38 66 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 C14orf28Q4W4Y0 310 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 CYBRD1Q53TN4 286 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 UGT2A3Q6UWM9 527 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 WDR5BQ86VZ2 330 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 ZDHHC13Q8IUH4 622 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 SAMD14Q8IZD0 417 aaPredicted RBP12.19□□□□□ -0.46
SNX1-211ENST00000560829 CSNK1A1LQ8N752 337 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms