RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 GRK3P35626 688 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 KCNJ1P48048 391 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 CCR8P51685 355 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 SKP1P63208 163 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 SORDQ00796 357 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 RGS1Q08116 209 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 DHX9Q08211 1270 aaKnown RBP9.14□□□□□ -0.95
TPM1-225ENST00000560679 NAE1Q13564 534 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 PPP1R7Q15435 360 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 CCNG2Q16589 344 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 KCTD19Q17RG1 926 aaPredicted RBP9.14□□□□□ -0.95
TPM1-225ENST00000560679 FAM47EQ6ZV65 393 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 ABHD13Q7L211 337 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 STRA8Q7Z7C7 330 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 PHC2Q8IXK0 858 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 FBXW8Q8N3Y1 598 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 ZNF321PQ8N8H1 164 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 ANKRD53Q8N9V6 530 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 GOLM1Q8NBJ4 401 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 ARMC2Q8NEN0 867 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 UBLCP1Q8WVY7 318 aaPredicted RBP9.14□□□□□ -0.95
TPM1-225ENST00000560679 GPR21Q99679 349 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 SLC6A15Q9H2J7 730 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 KLHL31Q9H511 634 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 LDAHQ9H6V9 325 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 SH2D2AQ9NP31 389 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 INTS10Q9NVR2 710 aaKnown RBP9.14□□□□□ -0.95
TPM1-225ENST00000560679 WHRNQ9P202 907 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 FOXD3Q9UJU5 478 aaPredicted RBP9.14□□□□□ -0.95
TPM1-225ENST00000560679 SOX13Q9UN79 622 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 DHRS7Q9Y394 339 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 CHD3Q12873 2000 aaKnown RBP9.14□□□□□ -0.95
TPM1-225ENST00000560679 HMGB1P1B2RPK0 211 aaPredicted RBP9.13□□□□□ -0.95
TPM1-225ENST00000560679 PSMD12O00232 456 aaPredicted RBP9.13□□□□□ -0.95
TPM1-225ENST00000560679 CLDN4O14493 209 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 ARHGEF9O43307 516 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 RPL22P35268 128 aaKnown RBP9.13□□□□□ -0.95
TPM1-225ENST00000560679 PIGAP37287 484 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 HNF4AP41235 474 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 SCTRP47872 440 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 PLTPP55058 493 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 PPP2R2BQ00005 443 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 REEP5Q00765 189 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 TIAL1Q01085 375 aaKnown RBP eCLIP9.13□□□□□ -0.95
TPM1-225ENST00000560679 KRTAP1-1Q07627 177 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 CALCOCO2Q13137 446 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 CTBP1Q13363 440 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 SLC10A1Q14973 349 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 PHKG1Q16816 387 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 CATSPEREQ5SY80 951 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 CEP85LQ5SZL2 805 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 HECTD2Q5U5R9 776 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 AGBL2Q5U5Z8 902 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 ZNF470Q6ECI4 717 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 NIPAL1Q6NVV3 410 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 DENND6AQ8IWF6 608 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 LRRC75A-AS1Q8N1F1 130 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 NEIL3Q8TAT5 605 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 FBXO25Q8TCJ0 367 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 ALKBH8Q96BT7 664 aaKnown RBP9.13□□□□□ -0.95
TPM1-225ENST00000560679 PYCR2Q96C36 320 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 ATP6V1G3Q96LB4 118 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 WDR83Q9BRX9 315 aaKnown RBP9.13□□□□□ -0.95
TPM1-225ENST00000560679 EXO5Q9H790 373 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 CLK4Q9HAZ1 481 aaKnown RBP9.13□□□□□ -0.95
TPM1-225ENST00000560679 TMBIM4Q9HC24 238 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 ADAP2Q9NPF8 381 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 FBXO6Q9NRD1 293 aaPredicted RBP9.13□□□□□ -0.95
TPM1-225ENST00000560679 SACM1LQ9NTJ5 587 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 SAMD15Q9P1V8 674 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 PAK5Q9P286 719 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 ZNF629Q9UEG4 869 aaPredicted RBP9.13□□□□□ -0.95
TPM1-225ENST00000560679 ZFP69BQ9UJL9 534 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 PCDHGB3Q9Y5G1 929 aa9.13□□□□□ -0.95
TPM1-225ENST00000560679 RAI1Q7Z5J4 1906 aaPredicted RBP9.12□□□□□ -0.95
TPM1-225ENST00000560679 TCRBV7S3A2A0A539 114 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 PFDN6O15212 129 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 SHOX2O60902 331 aaPredicted RBP9.12□□□□□ -0.95
TPM1-225ENST00000560679 EPPINO95925 133 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 C8BP07358 591 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 NUDT17P0C025 328 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 MYZAPP0CAP1 466 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 CCND1P24385 295 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 TIMP3P35625 211 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 AHRP35869 848 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 SLC1A2P43004 574 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 NPY2RP49146 381 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 AGFG1P52594 562 aaKnown RBP9.12□□□□□ -0.95
TPM1-225ENST00000560679 CAV1Q03135 178 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 ZNF844Q08AG5 666 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 SNX1Q13596 522 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 RUNX2Q13950 521 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 SLMAPQ14BN4 828 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 ELAVL1Q15717 326 aaKnown RBP9.12□□□□□ -0.95
TPM1-225ENST00000560679 NEPROQ6NW34 567 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 DRICH1Q6PGQ1 229 aaPredicted RBP9.12□□□□□ -0.95
TPM1-225ENST00000560679 HSDL2Q6YN16 418 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 YTHDF3Q7Z739 585 aaKnown RBP9.12□□□□□ -0.95
TPM1-225ENST00000560679 CLNKQ7Z7G1 428 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 KIF18BQ86Y91 864 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms