RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 FBXL4Q9UKA2 621 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 LOC400499M0QZD8 3231 aa13.15□□□□□ -0.3
PKNOX1-209ENST00000560448 IGKV3D-11A0A0A0MRZ8 115 aa13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 TCRBV16S1A1N1A0A5B0 115 aa13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 CDK2AP1O14519 115 aa13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 AZIN1O14977 448 aa13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 CTNSO60931 367 aa13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 DCTN3O75935 186 aa13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 RSL1D1O76021 490 aaKnown RBP13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 ETHE1O95571 254 aa13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 ALPPP05187 535 aa13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 COX6A1P12074 109 aa13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 CPN2P22792 545 aa13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 PRPH2P23942 346 aa13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 KCNAB2Q13303 367 aa13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 ARL13AQ5H913 290 aaPredicted RBP13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 FAM69BQ5VUD6 431 aa13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 TCTN3Q6NUS6 607 aa13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 JMJD6Q6NYC1 403 aaPredicted RBP13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 GALNT18Q6P9A2 607 aa13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 MTFMTQ96DP5 389 aaKnown RBP13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 PTCHD1Q96NR3 888 aa13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 PELOQ9BRX2 385 aaKnown RBP13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 MYLK2Q9H1R3 596 aa13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 PRTFDC1Q9NRG1 225 aa13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 C5AR2Q9P296 337 aa13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 WBP11Q9Y2W2 641 aaKnown RBP13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 DSPP15924 2871 aaKnown RBP13.14□□□□□ -0.31
PKNOX1-209ENST00000560448 A0A0G2JN53 185 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 A0A0G2JND7 137 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 SLC28A1O00337 649 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 SAP18O00422 153 aaKnown RBP13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 RTCAO00442 366 aaKnown RBP13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 B4GALT2O60909 372 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 JRKO75564 520 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 CDC123O75794 336 aaPredicted RBP13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 B3GALT4O96024 378 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 FAM58BPP0C7Q3 252 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 ALOX15P16050 662 aaPredicted RBP13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 TNFRSF17Q02223 184 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 ACSM2AQ08AH3 577 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 TBL3Q12788 808 aaKnown RBP13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 MYBPC3Q14896 1274 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 IMPG1Q17R60 797 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 KANK2Q63ZY3 851 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 ACSM2BQ68CK6 577 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 PLAG1Q6DJT9 500 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 ANKRD37Q7Z713 158 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 GALNT16Q8N428 558 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 CHTF18Q8WVB6 975 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 TM9SF4Q92544 642 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 LRRC37BQ96QE4 947 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 SIKE1Q9BRV8 207 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 ACPTQ9BZG2 426 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 LHPPQ9H008 270 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 FARSBQ9NSD9 589 aaKnown RBP13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 RYDENQ9NUL5 291 aaKnown RBP13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 GPR83Q9NYM4 423 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 MCM8Q9UJA3 840 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 TIMM22Q9Y584 194 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 ZNF195O14628 629 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 PROM1O43490 865 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 RGS14O43566 566 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 DNAJC8O75937 253 aaPredicted RBP13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 SERPINA7P05543 415 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 MAPK12P53778 367 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 OR4D2P58180 307 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 SLC13A2Q13183 592 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 PCOLCEQ15113 449 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 SGO1Q5FBB7 561 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 CCNYL2Q5T2Q4 361 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 VWA5B1Q5TIE3 1220 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 OR52E8Q6IFG1 317 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 COMMD6Q7Z4G1 85 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 KBTBD2Q8IY47 623 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 RNF175Q8N4F7 328 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 EFCAB3Q8N7B9 438 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 C9orf43Q8TAL5 461 aaPredicted RBP13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 M1APQ8TC57 530 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 PIWIL2Q8TC59 973 aaKnown RBP13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 IMMP1LQ96LU5 166 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 MAPKAP1Q9BPZ7 522 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 SLC25A23Q9BV35 468 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 FAIM2Q9BWQ8 316 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 MRPL1Q9BYD6 325 aaKnown RBP13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 RBCK1Q9BYM8 510 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 SLC25A18Q9H1K4 315 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 RPF2Q9H7B2 306 aaKnown RBP13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 ADAP2Q9NPF8 381 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 HEY2Q9UBP5 337 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 HAO1Q9UJM8 370 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 TMED5Q9Y3A6 229 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 ZNF451Q9Y4E5 1061 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 TRAF6Q9Y4K3 522 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 ASB4Q9Y574 426 aa13.13□□□□□ -0.31
PKNOX1-209ENST00000560448 C1orf226A1L170 272 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 DYRK3O43781 588 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 DNAJB6O75190 326 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 SH3BGRLO75368 114 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms