RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 NEURL1O76050 574 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 IFNA16P05015 189 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 SNRPAP09012 282 aaKnown RBP13.71□□□□□ -0.21
IDH3A-219ENST00000560414 GP1BBP13224 206 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 CNTFP26441 200 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 SERPINB1P30740 379 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 PIK3CBP42338 1070 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 SSR2P43308 183 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 GPR143P51810 404 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 NEK2P51955 445 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 KCNK10P57789 538 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 RCN2Q14257 317 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 OR4C11Q6IEV9 310 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 RPS27LQ71UM5 84 aaKnown RBP13.71□□□□□ -0.21
IDH3A-219ENST00000560414 LGI4Q8N135 537 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 OR52B6Q8NGF0 335 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 SREK1Q8WXA9 508 aaKnown RBP13.71□□□□□ -0.21
IDH3A-219ENST00000560414 NCLNQ969V3 563 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 NSUN5Q96P11 429 aaKnown RBP13.71□□□□□ -0.21
IDH3A-219ENST00000560414 ALOXE3Q9BYJ1 711 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 LRFN1Q9P244 771 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 ADGRE2Q9UHX3 823 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 H0YIV9 168 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 PLPP1O14494 284 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 RIPK2O43353 540 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 PRKNO60260 465 aaPredicted RBP13.7□□□□□ -0.22
IDH3A-219ENST00000560414 SMIM24O75264 130 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 SCELO95171 688 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 LDLRP01130 860 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 ABHD2P08910 425 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 COL6A2P12110 1019 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 CPN2P22792 545 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 ARL1P40616 181 aaPredicted RBP13.7□□□□□ -0.22
IDH3A-219ENST00000560414 CLCN2P51788 898 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 RAP1GDS1P52306 607 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 STX4Q12846 297 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 SLAMF1Q13291 335 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 TERF2Q15554 542 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 ZRSR2Q15696 482 aaKnown RBP13.7□□□□□ -0.22
IDH3A-219ENST00000560414 OCLNQ16625 522 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 TSNAXIP1Q2TAA8 658 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 C16orf47Q6ZP98 133 aaPredicted RBP13.7□□□□□ -0.22
IDH3A-219ENST00000560414 TRMT10CQ7L0Y3 403 aaKnown RBP13.7□□□□□ -0.22
IDH3A-219ENST00000560414 GALNTL5Q7Z4T8 443 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 ZNF227Q86WZ6 799 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 OR4N5Q8IXE1 308 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 GSPT2Q8IYD1 628 aaKnown RBP13.7□□□□□ -0.22
IDH3A-219ENST00000560414 L3MBTL4Q8NA19 623 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 DNAJB8Q8NHS0 232 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 ATP6V1E2Q96A05 226 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 RGMAQ96B86 450 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 MTFMTQ96DP5 389 aaKnown RBP13.7□□□□□ -0.22
IDH3A-219ENST00000560414 SCMH1Q96GD3 660 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 C5orf34Q96MH7 638 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 LIN28AQ9H9Z2 209 aaKnown RBP13.7□□□□□ -0.22
IDH3A-219ENST00000560414 ZBTB26Q9HCK0 441 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 ADAP2Q9NPF8 381 aa13.7□□□□□ -0.22
IDH3A-219ENST00000560414 WIPF3A6NGB9 483 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 STX16-NPEPL1H3BU86 382 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 STX16O14662 325 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 LRRTM2O43300 516 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 UGDHO60701 494 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 PRKRAO75569 313 aaKnown RBP13.69□□□□□ -0.22
IDH3A-219ENST00000560414 CLDN9O95484 217 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 ETHE1O95571 254 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 DDAH2O95865 285 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 CRYABP02511 175 aaKnown RBP13.69□□□□□ -0.22
IDH3A-219ENST00000560414 SP1P08047 785 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 SBK3P0C264 359 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 PTX3P26022 381 aaPredicted RBP13.69□□□□□ -0.22
IDH3A-219ENST00000560414 CYB561P49447 251 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 ELAVL1Q15717 326 aaKnown RBP13.69□□□□□ -0.22
IDH3A-219ENST00000560414 MAPKAPK3Q16644 382 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 FAM219BQ5XKK7 198 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 SLC25A25Q6KCM7 469 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 GFRALQ6UXV0 394 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 TMEM151AQ8N4L1 468 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 ZNF321PQ8N8H1 164 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 WDR20Q8TBZ3 569 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 PTPMT1Q8WUK0 201 aaPredicted RBP13.69□□□□□ -0.22
IDH3A-219ENST00000560414 ANKRD9Q96BM1 317 aaPredicted RBP13.69□□□□□ -0.22
IDH3A-219ENST00000560414 REPS1Q96D71 796 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 VMP1Q96GC9 406 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 MRPL57Q9BQC6 102 aaKnown RBP13.69□□□□□ -0.22
IDH3A-219ENST00000560414 ZNF717Q9BY31 904 aaPredicted RBP13.69□□□□□ -0.22
IDH3A-219ENST00000560414 TXLNGYQ9BZA5 131 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 MRPL46Q9H2W6 279 aaKnown RBP13.69□□□□□ -0.22
IDH3A-219ENST00000560414 SEMA4BQ9NPR2 832 aaPredicted RBP13.69□□□□□ -0.22
IDH3A-219ENST00000560414 VTI1BQ9UEU0 232 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 PLEKHB1Q9UF11 243 aaPredicted RBP13.69□□□□□ -0.22
IDH3A-219ENST00000560414 PCTPQ9UKL6 214 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 PPIEQ9UNP9 301 aaKnown RBP13.69□□□□□ -0.22
IDH3A-219ENST00000560414 TSC22D4Q9Y3Q8 395 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 PCDHGB6Q9Y5F9 930 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 CLCA3PQ9Y6N3 262 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 SPACA6W5XKT8 324 aa13.69□□□□□ -0.22
IDH3A-219ENST00000560414 DIDO1Q9BTC0 2240 aaKnown RBP13.68□□□□□ -0.22
IDH3A-219ENST00000560414 A0A1B0GTL3 188 aa13.68□□□□□ -0.22
IDH3A-219ENST00000560414 PPP6CO00743 305 aa13.68□□□□□ -0.22
IDH3A-219ENST00000560414 FGF17O60258 216 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms