RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 KLHL1Q9NR64 748 aa12.71□□□□□ -0.37
SMAD3-214ENST00000560402 LRFN1Q9P244 771 aa12.71□□□□□ -0.37
SMAD3-214ENST00000560402 SH3BGRL2Q9UJC5 107 aa12.71□□□□□ -0.37
SMAD3-214ENST00000560402 DCTN4Q9UJW0 460 aa12.71□□□□□ -0.37
SMAD3-214ENST00000560402 PKDREJQ9NTG1 2253 aa12.71□□□□□ -0.38
SMAD3-214ENST00000560402 GTF3C1Q12789 2109 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 OR2W5A6NFC9 320 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 SLCO1B7G3V0H7 640 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 FCHO1O14526 889 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 CHST10O43529 356 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 NME2P1O60361 137 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 CCDC22O60826 627 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 SLC25A12O75746 678 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 SP1P08047 785 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 ZNF888P0CJ79 500 aaPredicted RBP12.7□□□□□ -0.38
SMAD3-214ENST00000560402 RNH1P13489 461 aaKnown RBP12.7□□□□□ -0.38
SMAD3-214ENST00000560402 ZNF24P17028 368 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 ZNF37AP17032 561 aaPredicted RBP12.7□□□□□ -0.38
SMAD3-214ENST00000560402 NME2P22392 152 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 ATP5F1P24539 256 aaPredicted RBP12.7□□□□□ -0.38
SMAD3-214ENST00000560402 GSTM2P28161 218 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 GRNP28799 593 aaKnown RBP12.7□□□□□ -0.38
SMAD3-214ENST00000560402 ADORA2A-AS1P86434 159 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 CDKL1Q00532 357 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 IRF9Q00978 393 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 ACAP2Q15057 778 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 PPP1R3AQ16821 1122 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 CATSPEREQ5SY80 951 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 SPINK14Q6IE38 97 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 SLC25A25Q6KCM7 469 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 SBSNQ6UWP8 590 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 GALNTL5Q7Z4T8 443 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 TMPRSS11BQ86T26 416 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 RPS19BP1Q86WX3 136 aaKnown RBP12.7□□□□□ -0.38
SMAD3-214ENST00000560402 SPPL2CQ8IUH8 684 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 SIAH3Q8IW03 269 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 ARMC10Q8N2F6 343 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 NKAPQ8N5F7 415 aaKnown RBP12.7□□□□□ -0.38
SMAD3-214ENST00000560402 POGLUT1Q8NBL1 392 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 UTP15Q8TED0 518 aaKnown RBP12.7□□□□□ -0.38
SMAD3-214ENST00000560402 PHF10Q8WUB8 498 aaKnown RBP12.7□□□□□ -0.38
SMAD3-214ENST00000560402 TMEM125Q96AQ2 219 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 ERP27Q96DN0 273 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 THOC1Q96FV9 657 aaKnown RBP12.7□□□□□ -0.38
SMAD3-214ENST00000560402 OLFM1Q99784 485 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 HES7Q9BYE0 225 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 PRDM9Q9NQV7 894 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 OXSMQ9NWU1 459 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 ANKRD10Q9NXR5 420 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 XPR1Q9UBH6 696 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 TINAGQ9UJW2 476 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 MMACHCQ9Y4U1 282 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 KCNE2Q9Y6J6 123 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 OTOGQ6ZRI0 2925 aa12.7□□□□□ -0.38
SMAD3-214ENST00000560402 IGKV3D-11A0A0A0MRZ8 115 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 TCRBV16S1A1N1A0A5B0 115 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 PRMT3O60678 531 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 SMIM24O75264 130 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 DNAJC8O75937 253 aaPredicted RBP12.69□□□□□ -0.38
SMAD3-214ENST00000560402 UBOX5O94941 541 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 GUCA1CO95843 209 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 SERPIND1P05546 499 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 SERPINA6P08185 405 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 TRHRP34981 398 aaPredicted RBP12.69□□□□□ -0.38
SMAD3-214ENST00000560402 CYB561P49447 251 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 HNMTP50135 292 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 NAA20P61599 178 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 STXBP1P61764 594 aaKnown RBP12.69□□□□□ -0.38
SMAD3-214ENST00000560402 ZXDCQ2QGD7 858 aaPredicted RBP12.69□□□□□ -0.38
SMAD3-214ENST00000560402 SHISA5Q8N114 240 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 PLD6Q8N2A8 252 aaKnown RBP12.69□□□□□ -0.38
SMAD3-214ENST00000560402 AMER2Q8N7J2 671 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 TTLQ8NG68 377 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 ADAMTS18Q8TE60 1221 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 RILPQ96NA2 401 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 PTCHD1Q96NR3 888 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 CDCP1Q9H5V8 836 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 EML4Q9HC35 981 aaKnown RBP12.69□□□□□ -0.38
SMAD3-214ENST00000560402 SAR1AQ9NR31 198 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 TMCO1Q9UM00 188 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 SLC12A4Q9UP95 1085 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 FBN2P35556 2912 aa12.69□□□□□ -0.38
SMAD3-214ENST00000560402 A0A088AWK7 358 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 NPIPA5E9PKD4 350 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 G3V2L1 256 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 ASNA1O43681 348 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 MAN1A2O60476 641 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 NPHS1O60500 1241 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 CLDN14O95500 239 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 CCDC166P0CW27 439 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 ABOP16442 354 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 ZNF10P21506 573 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-214ENST00000560402 TPP2P29144 1249 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-214ENST00000560402 MLF1P58340 268 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 DNAJB13P59910 316 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 ATP6V0D1P61421 351 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 OLR1P78380 273 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 SRSF11Q05519 484 aaKnown RBP12.68□□□□□ -0.38
SMAD3-214ENST00000560402 RCN2Q14257 317 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 NXPE4Q6UWF7 544 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms