RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 OR5L2Q8NGL0 311 aa9.92□□□□□ -0.82
TRAF3-207ENST00000559734 OR56A3Q8NH54 315 aa9.92□□□□□ -0.82
TRAF3-207ENST00000559734 OR14A16Q8NHC5 309 aa9.92□□□□□ -0.82
TRAF3-207ENST00000559734 SLC2A12Q8TD20 617 aa9.92□□□□□ -0.82
TRAF3-207ENST00000559734 PIGTQ969N2 578 aa9.92□□□□□ -0.82
TRAF3-207ENST00000559734 SMIM10Q96HG1 83 aa9.92□□□□□ -0.82
TRAF3-207ENST00000559734 DACH2Q96NX9 599 aa9.92□□□□□ -0.82
TRAF3-207ENST00000559734 CSF3RQ99062 836 aa9.92□□□□□ -0.82
TRAF3-207ENST00000559734 CCL19Q99731 98 aa9.92□□□□□ -0.82
TRAF3-207ENST00000559734 WDR83Q9BRX9 315 aaKnown RBP9.92□□□□□ -0.82
TRAF3-207ENST00000559734 RBM24Q9BX46 236 aaKnown RBP9.92□□□□□ -0.82
TRAF3-207ENST00000559734 AICDAQ9GZX7 198 aa9.92□□□□□ -0.82
TRAF3-207ENST00000559734 ZFP64Q9NPA5 681 aa9.92□□□□□ -0.82
TRAF3-207ENST00000559734 C6orf203Q9P0P8 240 aaPredicted RBP9.92□□□□□ -0.82
TRAF3-207ENST00000559734 COPS7AQ9UBW8 275 aa9.92□□□□□ -0.82
TRAF3-207ENST00000559734 METRNQ9UJH8 293 aa9.92□□□□□ -0.82
TRAF3-207ENST00000559734 PCDHGB3Q9Y5G1 929 aa9.92□□□□□ -0.82
TRAF3-207ENST00000559734 CLDN16Q9Y5I7 305 aa9.92□□□□□ -0.82
TRAF3-207ENST00000559734 COMMD10Q9Y6G5 202 aa9.92□□□□□ -0.82
TRAF3-207ENST00000559734 CAPN6Q9Y6Q1 641 aa9.92□□□□□ -0.82
TRAF3-207ENST00000559734 LRRC3CA6NJW4 275 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 EIF3FO00303 357 aaPredicted RBP9.91□□□□□ -0.82
TRAF3-207ENST00000559734 ERN1O75460 977 aaKnown RBP9.91□□□□□ -0.82
TRAF3-207ENST00000559734 HAUS5O94927 633 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 SERPINA6P08185 405 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 NID1P14543 1247 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 CTSSP25774 331 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 OPRM1P35372 400 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 VPS41P49754 854 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 STXBP1P61764 594 aaKnown RBP9.91□□□□□ -0.82
TRAF3-207ENST00000559734 ID2Q02363 134 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 HMBOX1Q6NT76 420 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 UGT3A1Q6NUS8 523 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 PAQR3Q6TCH7 311 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.91□□□□□ -0.82
TRAF3-207ENST00000559734 ZNF595Q8IYB9 648 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 MORN4Q8NDC4 146 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 SLC22A8Q8TCC7 542 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 PTPMT1Q8WUK0 201 aaPredicted RBP9.91□□□□□ -0.82
TRAF3-207ENST00000559734 SMPDL3BQ92485 455 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 GAL3ST3Q96A11 431 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 HES6Q96HZ4 224 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 DOHHQ9BU89 302 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 ALOXE3Q9BYJ1 711 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 COPS7BQ9H9Q2 264 aaPredicted RBP9.91□□□□□ -0.82
TRAF3-207ENST00000559734 PELI2Q9HAT8 420 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 PRM3Q9NNZ6 103 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 ACKR4Q9NPB9 350 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 C20orf96Q9NUD7 363 aaPredicted RBP9.91□□□□□ -0.82
TRAF3-207ENST00000559734 GALNT8Q9NY28 637 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 SLC6A5Q9Y345 797 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 MAD1L1Q9Y6D9 718 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 ARHGAP21Q5T5U3 1957 aa9.91□□□□□ -0.82
TRAF3-207ENST00000559734 HIVEP2P31629 2446 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 A0A088AWK7 358 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 LDB3O75112 727 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 CRLF1O75462 422 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 CNOT4O95628 575 aaKnown RBP9.9□□□□□ -0.82
TRAF3-207ENST00000559734 TMIGD3P0DMS9 266 aaPredicted RBP9.9□□□□□ -0.82
TRAF3-207ENST00000559734 TPSB2P20231 275 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 ZNF10P21506 573 aaPredicted RBP9.9□□□□□ -0.82
TRAF3-207ENST00000559734 CERS1P27544 350 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 CPOXP36551 454 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 PLA2G16P53816 162 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 CRYZQ08257 329 aaKnown RBP9.9□□□□□ -0.82
TRAF3-207ENST00000559734 TOMM20Q15388 145 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 TRIP13Q15645 432 aaPredicted RBP9.9□□□□□ -0.82
TRAF3-207ENST00000559734 TPSAB1Q15661 275 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 NSUN5P2Q63ZY6 315 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 ADGRD1Q6QNK2 874 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 NXPE4Q6UWF7 544 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 PRSS57Q6UWY2 283 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 KLHDC8AQ8IYD2 350 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 PM20D2Q8IYS1 436 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 LRRC25Q8N386 305 aaPredicted RBP9.9□□□□□ -0.82
TRAF3-207ENST00000559734 RASGEF1CQ8N431 466 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 GABPB2Q8TAK5 448 aaPredicted RBP9.9□□□□□ -0.82
TRAF3-207ENST00000559734 ISL2Q96A47 359 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 SPACA9Q96E40 222 aaPredicted RBP9.9□□□□□ -0.82
TRAF3-207ENST00000559734 ZNF597Q96LX8 424 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 GAL3ST4Q96RP7 486 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 TIMP4Q99727 224 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 PIP5K1AQ99755 562 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 NPLQ9BXD5 320 aaPredicted RBP9.9□□□□□ -0.82
TRAF3-207ENST00000559734 TRIM54Q9BYV2 358 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 FBXO5Q9UKT4 447 aa9.9□□□□□ -0.82
TRAF3-207ENST00000559734 MPDZO75970 2070 aa9.89□□□□□ -0.83
TRAF3-207ENST00000559734 EML6Q6ZMW3 1958 aa9.89□□□□□ -0.83
TRAF3-207ENST00000559734 MBD3L4A6NDZ8 208 aaPredicted RBP9.89□□□□□ -0.83
TRAF3-207ENST00000559734 MBD3L5A6NJ08 208 aaPredicted RBP9.89□□□□□ -0.83
TRAF3-207ENST00000559734 ETHE1O95571 254 aa9.89□□□□□ -0.83
TRAF3-207ENST00000559734 HNRNPH1P31943 449 aaKnown RBP9.89□□□□□ -0.83
TRAF3-207ENST00000559734 MSH2P43246 934 aa9.89□□□□□ -0.83
TRAF3-207ENST00000559734 SARNPP82979 210 aaKnown RBP9.89□□□□□ -0.83
TRAF3-207ENST00000559734 SF3B4Q15427 424 aaKnown RBP eCLIP9.89□□□□□ -0.83
TRAF3-207ENST00000559734 ZNF791Q3KP31 576 aaPredicted RBP9.89□□□□□ -0.83
TRAF3-207ENST00000559734 BBS9Q3SYG4 887 aa9.89□□□□□ -0.83
TRAF3-207ENST00000559734 PIGGQ5H8A4 983 aa9.89□□□□□ -0.83
TRAF3-207ENST00000559734 C4orf22Q6V702 233 aa9.89□□□□□ -0.83
TRAF3-207ENST00000559734 THOC6Q86W42 341 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms