RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 GFYI3L273 518 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 KCNAB3O43448 404 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 SMNDC1O75940 238 aaKnown RBP eCLIP8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 IFNB1P01574 187 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 APRTP07741 180 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 NPPBP16860 134 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 RPL22P35268 128 aaKnown RBP8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 SOX18P35713 384 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 CETN2P41208 172 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 SKIV2L2P42285 1042 aaKnown RBP8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 MAGEA1P43355 309 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 SLCO1A2P46721 670 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 CLCN7P51798 805 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 ID2Q02363 134 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 FAM27E3Q08E93 113 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 RUNX2Q13950 521 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 RBBP5Q15291 538 aaKnown RBP8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 TERF2Q15554 542 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 PCID2Q5JVF3 399 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 LCE2CQ5TA81 110 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 DESI1Q6ICB0 168 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 MRNIPQ6NTE8 343 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 LUZP1Q86V48 1076 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 SCUBE1Q8IWY4 988 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 CPNE9Q8IYJ1 553 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 PM20D2Q8IYS1 436 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 LRRC25Q8N386 305 aaPredicted RBP8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 MPP5Q8N3R9 675 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 TBC1D19Q8N5T2 526 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 MEIOBQ8N635 442 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 MBD3L2Q8NHZ7 208 aaPredicted RBP8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 NT5CQ8TCD5 201 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 DOK4Q8TEW6 326 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 ATG4AQ8WYN0 398 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 PMM1Q92871 262 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 IQCDQ96DY2 449 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 ZBED6CLQ96FA7 236 aaPredicted RBP8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 FAM111AQ96PZ2 611 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 DOHHQ9BU89 302 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 REG4Q9BYZ8 158 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 FAM129AQ9BZQ8 928 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 AMBRA1Q9C0C7 1298 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 PCBD2Q9H0N5 130 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 PROK2Q9HC23 129 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 ACKR4Q9NPB9 350 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 EIF2B3Q9NR50 452 aaKnown RBP8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 ADAMTS6Q9UKP5 1117 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 INTUQ9ULD6 942 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 PPIEQ9UNP9 301 aaKnown RBP8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 TCRBV7S2A1N4TA0A589 114 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 TRBC2A0A5B9 178 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 CD8B2A6NJW9 211 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 C17orf105B2RV13 164 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 TLX2O43763 284 aaPredicted RBP8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 CD5LO43866 347 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 IL18BPO95998 194 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 FAM157CP0CG43 387 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 MPC1LP0DKB6 136 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 ARNTP27540 789 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 CTNNA1P35221 906 aaKnown RBP8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 CYLC1P35663 651 aaPredicted RBP8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 TPM4P67936 248 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 SRYQ05066 204 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 RCAN2Q14206 197 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 ELAVL1Q15717 326 aaKnown RBP8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 KCTD19Q17RG1 926 aaPredicted RBP8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 ZNF791Q3KP31 576 aaPredicted RBP8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 EIPR1Q53HC9 387 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 ANKRD34AQ69YU3 496 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 NIPAL1Q6NVV3 410 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 LCTLQ6UWM7 567 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 CYHR1Q6ZMK1 362 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 SYDE1Q6ZW31 735 aaPredicted RBP8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 ANKRD53Q8N9V6 530 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 ZNF511Q8NB15 262 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 OR10G3Q8NGC4 313 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 GABPB2Q8TAK5 448 aaPredicted RBP8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 SLC2A12Q8TD20 617 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 CCT6BQ92526 530 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 ANKRD9Q96BM1 317 aaPredicted RBP8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 MFSD3Q96ES6 412 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 WDYHV1Q96HA8 205 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 ZNF597Q96LX8 424 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 CSF3RQ99062 836 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 GPR21Q99679 349 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 UGT2B28Q9BY64 529 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 PRDM14Q9GZV8 571 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 AICDAQ9GZX7 198 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 CXorf56Q9H5V9 222 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 FBXO6Q9NRD1 293 aaPredicted RBP8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 TREX1Q9NSU2 369 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 ZNF226Q9NYT6 803 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 ZFP69BQ9UJL9 534 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 PDE10AQ9Y233 779 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 EFR3BQ9Y2G0 817 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 CLDN16Q9Y5I7 305 aa8.18□□□□□ -1.1
SNRPA1-208ENST00000559686 NINQ8N4C6 2090 aa8.17□□□□□ -1.1
SNRPA1-208ENST00000559686 CTAGE9A4FU28 777 aa8.17□□□□□ -1.1
SNRPA1-208ENST00000559686 GOLGA6L9A6NEM1 432 aa8.17□□□□□ -1.1
SNRPA1-208ENST00000559686 URADA6NGE7 173 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms