RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 DDX31Q9H8H2 851 aaKnown RBP13.8□□□□□ -0.2
RPL28-208ENST00000559463 PSD3Q9NYI0 1048 aa13.8□□□□□ -0.2
RPL28-208ENST00000559463 VTI1BQ9UEU0 232 aa13.8□□□□□ -0.2
RPL28-208ENST00000559463 ZNF225Q9UK10 706 aa13.8□□□□□ -0.2
RPL28-208ENST00000559463 PPT2Q9UMR5 302 aa13.8□□□□□ -0.2
RPL28-208ENST00000559463 SPACA6W5XKT8 324 aa13.8□□□□□ -0.2
RPL28-208ENST00000559463 DNAJC13O75165 2243 aa13.8□□□□□ -0.2
RPL28-208ENST00000559463 ZNF407Q9C0G0 2248 aa13.8□□□□□ -0.2
RPL28-208ENST00000559463 NAV2Q8IVL1 2488 aa13.8□□□□□ -0.2
RPL28-208ENST00000559463 CENPEQ02224 2701 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 A0A1W2PPM1 405 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 BLACEA4D250 179 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 FGF17O60258 216 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 DLX3O60479 287 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 RASAL1O95294 804 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 IFNA16P05015 189 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 CLCN2P51788 898 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 CDH13P55290 713 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 HERVK_113P63132 956 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 IGLV3-21P80748 117 aaPredicted RBP13.79□□□□□ -0.2
RPL28-208ENST00000559463 STX4Q12846 297 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 FRG2Q64ET8 278 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 MRM1Q6IN84 353 aaKnown RBP13.79□□□□□ -0.2
RPL28-208ENST00000559463 GPR180Q86V85 440 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 ZNF321PQ8N8H1 164 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 ACMSDQ8TDX5 336 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 THAP3Q8WTV1 239 aaPredicted RBP13.79□□□□□ -0.2
RPL28-208ENST00000559463 UBLCP1Q8WVY7 318 aaPredicted RBP13.79□□□□□ -0.2
RPL28-208ENST00000559463 NR4A3Q92570 626 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 MTFMTQ96DP5 389 aaKnown RBP13.79□□□□□ -0.2
RPL28-208ENST00000559463 TMEM237Q96Q45 408 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 FRG2BQ96QU4 278 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 ERVK-6Q9BXR3 956 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 KLHL1Q9NR64 748 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 ERRFI1Q9UJM3 462 aaPredicted RBP13.79□□□□□ -0.2
RPL28-208ENST00000559463 EMCNQ9ULC0 261 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 ATG4BQ9Y4P1 393 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 ASB4Q9Y574 426 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 PCDHGB6Q9Y5F9 930 aa13.79□□□□□ -0.2
RPL28-208ENST00000559463 MAST4O15021 2626 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 NINQ8N4C6 2090 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 SYNDIG1LA6NDD5 238 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 TMEM200CA6NKL6 621 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 PROM1O43490 865 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 SEMA3DO95025 777 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 DDAH2O95865 285 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 OTCP00480 354 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 MST1P26927 711 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 TRHRP34981 398 aaPredicted RBP13.78□□□□□ -0.2
RPL28-208ENST00000559463 HSD17B3P37058 310 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 SLCO1A2P46721 670 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 OC90Q02509 493 aaPredicted RBP13.78□□□□□ -0.2
RPL28-208ENST00000559463 CLCQ05315 142 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 SERTAD2Q14140 314 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 ELOAQ14241 798 aaKnown RBP13.78□□□□□ -0.2
RPL28-208ENST00000559463 UNC50Q53HI1 259 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 ZNF678Q5SXM1 525 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 SH2D5Q6ZV89 423 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 MILR1Q7Z6M3 343 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 OR4N5Q8IXE1 308 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 TMEM132CQ8N3T6 1108 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 OR14A16Q8NHC5 309 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 EPS8L3Q8TE67 593 aaKnown RBP13.78□□□□□ -0.2
RPL28-208ENST00000559463 PSMG3-AS1Q96PY0 264 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 SERPINI1Q99574 410 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 CCDC77Q9BR77 488 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 RPF2Q9H7B2 306 aaKnown RBP13.78□□□□□ -0.2
RPL28-208ENST00000559463 TRIM45Q9H8W5 580 aaPredicted RBP13.78□□□□□ -0.2
RPL28-208ENST00000559463 FARSBQ9NSD9 589 aaKnown RBP13.78□□□□□ -0.2
RPL28-208ENST00000559463 MS4A12Q9NXJ0 267 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 LRFN1Q9P244 771 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 PHF11Q9UIL8 331 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 CLCA3PQ9Y6N3 262 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 NCKAP5O14513 1909 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 FREM3P0C091 2139 aa13.78□□□□□ -0.2
RPL28-208ENST00000559463 A0A1W2PR48 441 aa13.77□□□□□ -0.21
RPL28-208ENST00000559463 C17orf105B2RV13 164 aa13.77□□□□□ -0.21
RPL28-208ENST00000559463 CDK2AP1O14519 115 aa13.77□□□□□ -0.21
RPL28-208ENST00000559463 SLC25A12O75746 678 aa13.77□□□□□ -0.21
RPL28-208ENST00000559463 WISP2O76076 250 aa13.77□□□□□ -0.21
RPL28-208ENST00000559463 PDYNP01213 254 aa13.77□□□□□ -0.21
RPL28-208ENST00000559463 GBAP04062 536 aa13.77□□□□□ -0.21
RPL28-208ENST00000559463 GSTA1P08263 222 aa13.77□□□□□ -0.21
RPL28-208ENST00000559463 CD46P15529 392 aa13.77□□□□□ -0.21
RPL28-208ENST00000559463 TAC1P20366 129 aa13.77□□□□□ -0.21
RPL28-208ENST00000559463 ATP5F1P24539 256 aaPredicted RBP13.77□□□□□ -0.21
RPL28-208ENST00000559463 STT3AP46977 705 aa13.77□□□□□ -0.21
RPL28-208ENST00000559463 CYB561P49447 251 aa13.77□□□□□ -0.21
RPL28-208ENST00000559463 HLCSP50747 726 aa13.77□□□□□ -0.21
RPL28-208ENST00000559463 PRKAA2P54646 552 aa13.77□□□□□ -0.21
RPL28-208ENST00000559463 FOLH1Q04609 750 aa13.77□□□□□ -0.21
RPL28-208ENST00000559463 SGO1Q5FBB7 561 aa13.77□□□□□ -0.21
RPL28-208ENST00000559463 C10orf62Q5T681 223 aaPredicted RBP13.77□□□□□ -0.21
RPL28-208ENST00000559463 TTC19Q6DKK2 380 aaPredicted RBP13.77□□□□□ -0.21
RPL28-208ENST00000559463 C16orf47Q6ZP98 133 aaPredicted RBP13.77□□□□□ -0.21
RPL28-208ENST00000559463 DGAT2L6Q6ZPD8 337 aa13.77□□□□□ -0.21
RPL28-208ENST00000559463 NUDT13Q86X67 352 aa13.77□□□□□ -0.21
RPL28-208ENST00000559463 TDRPQ86YL5 185 aa13.77□□□□□ -0.21
RPL28-208ENST00000559463 MORN4Q8NDC4 146 aa13.77□□□□□ -0.21
RPL28-208ENST00000559463 DNAJB8Q8NHS0 232 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms