RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 TIA1P31483 386 aaKnown RBP eCLIP10.71□□□□□ -0.69
SNX1-204ENST00000559061 HPDP32754 393 aaPredicted RBP10.71□□□□□ -0.69
SNX1-204ENST00000559061 SLC1A6P48664 564 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 CD97P48960 835 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 GPR143P51810 404 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 HSD17B7P56937 341 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 SKP1P63208 163 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 OCRLQ01968 901 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 ASPHQ12797 758 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 RAPSNQ13702 412 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 NSDHLQ15738 373 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 ZNF750Q32MQ0 723 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 NDUFAF7Q7L592 441 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 MAVSQ7Z434 540 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 OR4N5Q8IXE1 308 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 ZNF595Q8IYB9 648 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 EFCAB3Q8N7B9 438 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 ZNF321PQ8N8H1 164 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 GBP7Q8N8V2 638 aaPredicted RBP10.71□□□□□ -0.69
SNX1-204ENST00000559061 TMEM102Q8N9M5 508 aaPredicted RBP10.71□□□□□ -0.69
SNX1-204ENST00000559061 DNAJB14Q8TBM8 379 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 ADAMTS18Q8TE60 1221 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 PTCHD1Q96NR3 888 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 UBL7Q96S82 380 aaPredicted RBP10.71□□□□□ -0.69
SNX1-204ENST00000559061 ZNF552Q9H707 407 aaPredicted RBP10.71□□□□□ -0.69
SNX1-204ENST00000559061 PRTFDC1Q9NRG1 225 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 PNPOQ9NVS9 261 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 LYARQ9NX58 379 aaKnown RBP10.71□□□□□ -0.69
SNX1-204ENST00000559061 C5AR2Q9P296 337 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 DLGAP4Q9Y2H0 992 aa10.71□□□□□ -0.69
SNX1-204ENST00000559061 HMGB1P1B2RPK0 211 aaPredicted RBP10.7□□□□□ -0.7
SNX1-204ENST00000559061 HRKO00198 91 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 PCDH7O60245 1069 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 CTNSO60931 367 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 RSL1D1O76021 490 aaKnown RBP10.7□□□□□ -0.7
SNX1-204ENST00000559061 CLPSP04118 112 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 PRB1P04280 392 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 PRR35P0CG20 571 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 NR2F6P10588 404 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 ITGAMP11215 1152 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 CPN2P22792 545 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 SOX11P35716 441 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 CCL11P51671 97 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 SLC26A5P58743 744 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 FOLH1Q04609 750 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 BTKQ06187 659 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 KCNAB2Q13303 367 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 RFTN2Q52LD8 501 aaPredicted RBP10.7□□□□□ -0.7
SNX1-204ENST00000559061 NDUFAF5Q5TEU4 345 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 HHATQ5VTY9 493 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 PAPD4Q6PIY7 484 aaKnown RBP10.7□□□□□ -0.7
SNX1-204ENST00000559061 PARP9Q8IXQ6 854 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 CLYBLQ8N0X4 340 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 KIF2BQ8N4N8 673 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 APCDD1LQ8NCL9 501 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 DOK4Q8TEW6 326 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 PTPMT1Q8WUK0 201 aaPredicted RBP10.7□□□□□ -0.7
SNX1-204ENST00000559061 WBP1Q96G27 269 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 ABHD17AQ96GS6 310 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 IP6K3Q96PC2 410 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 PAIP2Q9BPZ3 127 aaKnown RBP10.7□□□□□ -0.7
SNX1-204ENST00000559061 RPF2Q9H7B2 306 aaKnown RBP10.7□□□□□ -0.7
SNX1-204ENST00000559061 PHF11Q9UIL8 331 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 MCM8Q9UJA3 840 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 PPIEQ9UNP9 301 aaKnown RBP10.7□□□□□ -0.7
SNX1-204ENST00000559061 TP53TG5Q9Y2B4 290 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 POLR3HQ9Y535 204 aaPredicted RBP10.7□□□□□ -0.7
SNX1-204ENST00000559061 PCDHA9Q9Y5H5 950 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 KALRNO60229 2985 aa10.7□□□□□ -0.7
SNX1-204ENST00000559061 FAM208BQ5VWN6 2430 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 NSG1A0A0A6YYJ2 146 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 SAGE2PA6NJ88 616 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 A6NL46 340 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 A8MUA0 341 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 PSMD12O00232 456 aaPredicted RBP10.69□□□□□ -0.7
SNX1-204ENST00000559061 PEX12O00623 359 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 ZNF195O14628 629 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 PRKNO60260 465 aaPredicted RBP10.69□□□□□ -0.7
SNX1-204ENST00000559061 SKAP2O75563 359 aaPredicted RBP10.69□□□□□ -0.7
SNX1-204ENST00000559061 HSPA4LO95757 839 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 DDAH2O95865 285 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 IL3P08700 152 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 GRK2P25098 689 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 PTGER1P34995 402 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 HK2P52789 917 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 MAPK12P53778 367 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 OR4D2P58180 307 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 AIMP2Q13155 320 aaKnown RBP10.69□□□□□ -0.7
SNX1-204ENST00000559061 STX3Q13277 289 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 SPIN4Q56A73 249 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 CCNYL2Q5T2Q4 361 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 B3GNTL1Q67FW5 361 aaPredicted RBP10.69□□□□□ -0.7
SNX1-204ENST00000559061 PLAG1Q6DJT9 500 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 FAM180BQ6P0A1 224 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 CYP20A1Q6UW02 462 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 GALNT16Q8N428 558 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 BRIX1Q8TDN6 353 aaKnown RBP10.69□□□□□ -0.7
SNX1-204ENST00000559061 C16orf78Q8WTQ4 265 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 NUDT8Q8WV74 236 aa10.69□□□□□ -0.7
SNX1-204ENST00000559061 EGLN2Q96KS0 407 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms