RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 KIAA1210Q9ULL0 1709 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 UBE4BO95155 1302 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 LOC105371242A0A075B767 164 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 YJEFN3A6XGL0 299 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 TRAFD1O14545 582 aaPredicted RBP3.79□□□□□ -1.8
CASC4-206ENST00000558847 SIGLEC5O15389 551 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 TNFSF12O43508 249 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 KIAA0513O60268 411 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 CSDE1O75534 798 aaKnown RBP3.79□□□□□ -1.8
CASC4-206ENST00000558847 TRIM16O95361 564 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 ANGPTL1O95841 491 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 RNF224P0DH78 156 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 RALAP11233 206 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 EZRP15311 586 aaKnown RBP3.79□□□□□ -1.8
CASC4-206ENST00000558847 DESP17661 470 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 GJB2P29033 226 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 PKLRP30613 574 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 FCGR2BP31994 310 aaPredicted RBP3.79□□□□□ -1.8
CASC4-206ENST00000558847 FCGR2CP31995 323 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 MMP12P39900 470 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 SLC6A12P48065 614 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 FHITP49789 147 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 CRYBA2P53672 197 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 HERV-K104P63124 156 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 PMP22Q01453 160 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 NME3Q13232 169 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 KRTAP24-1Q3LI83 254 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 FASTKD1Q53R41 847 aaKnown RBP3.79□□□□□ -1.8
CASC4-206ENST00000558847 HSP90AA5PQ58FG0 334 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 ARHGAP11AQ6P4F7 1023 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 C3P1Q6ZMU1 363 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 KIF6Q6ZMV9 814 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 MEX3BQ6ZN04 569 aaKnown RBP3.79□□□□□ -1.8
CASC4-206ENST00000558847 Q71RC1 249 aaPredicted RBP3.79□□□□□ -1.8
CASC4-206ENST00000558847 CACUL1Q86Y37 369 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 CCDC110Q8TBZ0 833 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 SLCO2A1Q92959 643 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 ERGIC2Q96RQ1 377 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 OVOL2Q9BRP0 275 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 ZNF577Q9BSK1 485 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 FUNDC2Q9BWH2 189 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 WWP1Q9H0M0 922 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 SLC26A1Q9H2B4 701 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 KCNK13Q9HB14 408 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 POLE3Q9NRF9 147 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 PLCXD1Q9NUJ7 323 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 SPASTQ9UBP0 616 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 COPS7AQ9UBW8 275 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 OR1A2Q9Y585 309 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 SPATA31D1Q6ZQQ2 1576 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 ARID2Q68CP9 1835 aa3.79□□□□□ -1.8
CASC4-206ENST00000558847 NEDD4P46934 1319 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 TMCO5BA8MYB1 307 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 K7EQD1 137 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 LRCH4O75427 683 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 SYNGR4O95473 234 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 TXNDC12O95881 172 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 AMBPP02760 352 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 TRIM49P0CI25 452 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 TRIM49CP0CI26 452 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 ZNF26P17031 533 aaPredicted RBP3.78□□□□□ -1.8
CASC4-206ENST00000558847 PRKACGP22612 351 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 EDNRAP25101 427 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 PPP2R1AP30153 589 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 ZFP36L2P47974 494 aaKnown RBP3.78□□□□□ -1.8
CASC4-206ENST00000558847 PITPNBP48739 271 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 NDST2P52849 883 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 HTD2P86397 168 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 MSLNQ13421 630 aaPredicted RBP3.78□□□□□ -1.8
CASC4-206ENST00000558847 SHROOM1Q2M3G4 852 aaPredicted RBP3.78□□□□□ -1.8
CASC4-206ENST00000558847 ZFP69Q49AA0 526 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 GPAT3Q53EU6 434 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 C12orf60Q5U649 245 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 IL23RQ5VWK5 629 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 CES4AQ5XG92 561 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 OR6B2Q6IFH4 312 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 LCLAT1Q6UWP7 414 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 GSG1LQ6UXU4 331 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 GVQW1Q8N7I0 195 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 ICA1LQ8NDH6 482 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 ZNF248Q8NDW4 579 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 OR4L1Q8NH43 312 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 NSMCE3Q96MG7 304 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 RAB40CQ96S21 281 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 COQ7Q99807 217 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 NMNAT2Q9BZQ4 307 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 RAB17Q9H0T7 212 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 DPEP3Q9H4B8 488 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 HPS4Q9NQG7 708 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 NDE1Q9NXR1 346 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 MRPS28Q9Y2Q9 187 aaKnown RBP3.78□□□□□ -1.8
CASC4-206ENST00000558847 ANGPTL3Q9Y5C1 460 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 RNF215Q9Y6U7 377 aa3.78□□□□□ -1.8
CASC4-206ENST00000558847 KPNA7A9QM74 516 aa3.77□□□□□ -1.81
CASC4-206ENST00000558847 TFECO14948 347 aaPredicted RBP3.77□□□□□ -1.81
CASC4-206ENST00000558847 LINC01565O15544 149 aa3.77□□□□□ -1.81
CASC4-206ENST00000558847 GRID2O43424 1007 aa3.77□□□□□ -1.81
CASC4-206ENST00000558847 OR6B1O95007 311 aa3.77□□□□□ -1.81
CASC4-206ENST00000558847 MBL2P11226 248 aaPredicted RBP3.77□□□□□ -1.81
CASC4-206ENST00000558847 B4GALT1P15291 398 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms