RNA–Protein interactions for RNA: ENST00000558645.5

CCDC33-204, Transcript of coiled-coil domain containing 33, humanhuman

TSL 3

Gene CCDC33, Length 589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-204ENST00000558645 ACSL6Q9UKU0 697 aa11.11□□□□□ -0.63
CCDC33-204ENST00000558645 EXO1Q9UQ84 846 aaKnown RBP11.11□□□□□ -0.63
CCDC33-204ENST00000558645 PTRH2Q9Y3E5 179 aaKnown RBP11.11□□□□□ -0.63
CCDC33-204ENST00000558645 FAM208BQ5VWN6 2430 aa11.11□□□□□ -0.63
CCDC33-204ENST00000558645 EML6Q6ZMW3 1958 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 IGLV3-12A0A075B6K2 115 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.1□□□□□ -0.63
CCDC33-204ENST00000558645 PSMD12O00232 456 aaPredicted RBP11.1□□□□□ -0.63
CCDC33-204ENST00000558645 TERTO14746 1132 aaKnown RBP11.1□□□□□ -0.63
CCDC33-204ENST00000558645 UBDO15205 165 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 KLF7O75840 302 aaPredicted RBP11.1□□□□□ -0.63
CCDC33-204ENST00000558645 LIPCP11150 499 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 PIM1P11309 404 aaPredicted RBP11.1□□□□□ -0.63
CCDC33-204ENST00000558645 LIFP15018 202 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 CD1EP15812 388 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 MAOAP21397 527 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 MAPK1P28482 360 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 PTGER1P34995 402 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 PCBP4P57723 403 aaKnown RBP11.1□□□□□ -0.63
CCDC33-204ENST00000558645 CLN3Q13286 438 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 DNASE1L3Q13609 305 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 ZNF750Q32MQ0 723 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 NDUFAF5Q5TEU4 345 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 FAM71E1Q6IPT2 247 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 NIPAL1Q6NVV3 410 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 SPATA21Q7Z572 469 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 TMEM132CQ8N3T6 1108 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.1□□□□□ -0.63
CCDC33-204ENST00000558645 DOK4Q8TEW6 326 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 FGF11Q92914 225 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 FKBP10Q96AY3 582 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 TEX37Q96LM6 180 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 SPSB2Q99619 263 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 CCDC28BQ9BUN5 200 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 VN1R1Q9GZP7 353 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 NSRP1Q9H0G5 558 aaKnown RBP11.1□□□□□ -0.63
CCDC33-204ENST00000558645 ACTL8Q9H568 366 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 MYNNQ9NPC7 610 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 AIG1Q9NVV5 245 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 PHF11Q9UIL8 331 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 MKL2Q9ULH7 1088 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 EIF3LQ9Y262 564 aaKnown RBP11.1□□□□□ -0.63
CCDC33-204ENST00000558645 TMED5Q9Y3A6 229 aa11.1□□□□□ -0.63
CCDC33-204ENST00000558645 TNRC6AQ8NDV7 1962 aaKnown RBP11.09□□□□□ -0.63
CCDC33-204ENST00000558645 EXPH5Q8NEV8 1989 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 VSTM2BA6NLU5 285 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 FGF17O60258 216 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 SNX3O60493 162 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 UMODP07911 640 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 C8orf89P0DMQ9 161 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 WT1P19544 449 aaPredicted RBP11.09□□□□□ -0.63
CCDC33-204ENST00000558645 NCF2P19878 526 aaPredicted RBP11.09□□□□□ -0.63
CCDC33-204ENST00000558645 EFNA1P20827 205 aaPredicted RBP11.09□□□□□ -0.63
CCDC33-204ENST00000558645 IL12AP29459 219 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 BUD31P41223 144 aaPredicted RBP11.09□□□□□ -0.63
CCDC33-204ENST00000558645 UFM1P61960 85 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 TRA2BP62995 288 aaKnown RBP11.09□□□□□ -0.63
CCDC33-204ENST00000558645 RHAGQ02094 409 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 DUSP2Q05923 314 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 MAD2L1Q13257 205 aaPredicted RBP11.09□□□□□ -0.63
CCDC33-204ENST00000558645 IL10RAQ13651 578 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 ZNF385BQ569K4 471 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 LANCL3Q6ZV70 420 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 SPATA19Q7Z5L4 167 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 HOMEZQ8IX15 550 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 OR7A2PQ8NGA2 310 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 OR9I1Q8NGQ6 314 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 KCNE4Q8WWG9 221 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 EXOSC8Q96B26 276 aaKnown RBP11.09□□□□□ -0.63
CCDC33-204ENST00000558645 ANKRD9Q96BM1 317 aaPredicted RBP11.09□□□□□ -0.63
CCDC33-204ENST00000558645 METTL2AQ96IZ6 378 aaKnown RBP11.09□□□□□ -0.63
CCDC33-204ENST00000558645 PTCHD1Q96NR3 888 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 CCT8L2Q96SF2 557 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 SIKE1Q9BRV8 207 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 TGIF2Q9GZN2 237 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 SLC26A1Q9H2B4 701 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 RPF2Q9H7B2 306 aaKnown RBP11.09□□□□□ -0.63
CCDC33-204ENST00000558645 GPN2Q9H9Y4 310 aaPredicted RBP11.09□□□□□ -0.63
CCDC33-204ENST00000558645 NECTIN3Q9NQS3 549 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 PRTFDC1Q9NRG1 225 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 ASIC5Q9NY37 505 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 C3orf18Q9UK00 162 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 FARSAQ9Y285 508 aaKnown RBP11.09□□□□□ -0.63
CCDC33-204ENST00000558645 PCDHA9Q9Y5H5 950 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 CLDN16Q9Y5I7 305 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 GPR45Q9Y5Y3 372 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 SPACA6W5XKT8 324 aa11.09□□□□□ -0.63
CCDC33-204ENST00000558645 IGHV3-20A0A0C4DH32 117 aa11.08□□□□□ -0.64
CCDC33-204ENST00000558645 A8MUA0 341 aa11.08□□□□□ -0.64
CCDC33-204ENST00000558645 IDSB3KWA1 339 aa11.08□□□□□ -0.64
CCDC33-204ENST00000558645 MASP2O00187 686 aa11.08□□□□□ -0.64
CCDC33-204ENST00000558645 ANKRD28O15084 1053 aa11.08□□□□□ -0.64
CCDC33-204ENST00000558645 PRMT3O60678 531 aa11.08□□□□□ -0.64
CCDC33-204ENST00000558645 ERAL1O75616 437 aaKnown RBP11.08□□□□□ -0.64
CCDC33-204ENST00000558645 RECKO95980 971 aa11.08□□□□□ -0.64
CCDC33-204ENST00000558645 ALBP02768 609 aa11.08□□□□□ -0.64
CCDC33-204ENST00000558645 HEXBP07686 556 aa11.08□□□□□ -0.64
CCDC33-204ENST00000558645 RAB40ALP0C0E4 278 aa11.08□□□□□ -0.64
CCDC33-204ENST00000558645 PRPS2P11908 318 aa11.08□□□□□ -0.64
CCDC33-204ENST00000558645 PTPN4P29074 926 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms