RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 PEX11AO75192 247 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 ANXA4P09525 319 aaPredicted RBP16.38■□□□□ 0.21
TPM1-214ENST00000558544 ACPPP15309 386 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 TLX1P31314 330 aaPredicted RBP16.38■□□□□ 0.21
TPM1-214ENST00000558544 HK2P52789 917 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 HSD17B7P56937 341 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 NDUFAF5Q5TEU4 345 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 NOXRED1Q6NXP6 359 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 ANKRD37Q7Z713 158 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 SCUBE1Q8IWY4 988 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 MMP21Q8N119 569 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 CDC26Q8NHZ8 85 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 PIWIL2Q8TC59 973 aaKnown RBP16.38■□□□□ 0.21
TPM1-214ENST00000558544 C16orf78Q8WTQ4 265 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 SNRNP27Q8WVK2 155 aaKnown RBP16.38■□□□□ 0.21
TPM1-214ENST00000558544 THAP4Q8WY91 577 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 UCN3Q969E3 161 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 TM4SF18Q96CE8 201 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 TUBGCP3Q96CW5 907 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 METTL2AQ96IZ6 378 aaKnown RBP16.38■□□□□ 0.21
TPM1-214ENST00000558544 PPP3R2Q96LZ3 170 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 PRORYQ9H606 182 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 WDR41Q9HAD4 459 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 P4HTMQ9NXG6 502 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 C19orf25Q9UFG5 118 aaPredicted RBP16.38■□□□□ 0.21
TPM1-214ENST00000558544 DLGAP4Q9Y2H0 992 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 DOCK10Q96BY6 2186 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 EPG5Q9HCE0 2579 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 IGKV3D-11A0A0A0MRZ8 115 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 IGHV3-20A0A0C4DH32 117 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 MYOCOSA0A1B0GUC4 107 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 BLACEA4D250 179 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 ARGFXA6NJG6 315 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 PEX12O00623 359 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 HDAC3O15379 428 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 GUCY1B2O75343 617 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 IL3P08700 152 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 TAS2R50P59544 299 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 TRA2BP62995 288 aaKnown RBP16.38■□□□□ 0.21
TPM1-214ENST00000558544 GUCY1A3Q02108 690 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 ID2Q02363 134 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 ZNF763Q0D2J5 394 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 RFTN2Q52LD8 501 aaPredicted RBP16.38■□□□□ 0.21
TPM1-214ENST00000558544 RGS9BPQ6ZS82 235 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 WDR75Q8IWA0 830 aaKnown RBP16.38■□□□□ 0.21
TPM1-214ENST00000558544 OR11G2Q8NGC1 345 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 NACC2Q96BF6 587 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 FCRL1Q96LA6 429 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 IP6K3Q96PC2 410 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 C1orf50Q9BV19 199 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 MEAF6Q9HAF1 191 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 FBXL4Q9UKA2 621 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 CLDN16Q9Y5I7 305 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 NBEAQ8NFP9 2946 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 LOC102723996A0A087X1L8 192 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 TCRBV16S1A1N1A0A5B0 115 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 WASHC1A8K0Z3 465 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 TCP11X1B4DZS4 312 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 MASP2O00187 686 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 PCDH17O14917 1159 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 FGF17O60258 216 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 CTNSO60931 367 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 COX6A1P12074 109 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 GYS2P54840 703 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 STX4Q12846 297 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 CHAF1BQ13112 559 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 C6orf136Q5SQH8 315 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 VWA5B1Q5TIE3 1220 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 CPZQ66K79 652 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 OR52E8Q6IFG1 317 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 CPEB2Q7Z5Q1 589 aaKnown RBP16.37■□□□□ 0.21
TPM1-214ENST00000558544 OR4N5Q8IXE1 308 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 FNDC5Q8NAU1 212 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 ANKRD9Q96BM1 317 aaPredicted RBP16.37■□□□□ 0.21
TPM1-214ENST00000558544 CATSPER2Q96P56 530 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 AKTIPQ9H8T0 292 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 C5AR2Q9P296 337 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 HEY2Q9UBP5 337 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 VTI1BQ9UEU0 232 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 TMED5Q9Y3A6 229 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 PCDHA9Q9Y5H5 950 aa16.37■□□□□ 0.21
TPM1-214ENST00000558544 ATMQ13315 3056 aa16.36■□□□□ 0.21
TPM1-214ENST00000558544 IGHV1-45A0A0A0MS14 117 aa16.36■□□□□ 0.21
TPM1-214ENST00000558544 C1orf226A1L170 272 aa16.36■□□□□ 0.21
TPM1-214ENST00000558544 SLCO1B7G3V0H7 640 aa16.36■□□□□ 0.21
TPM1-214ENST00000558544 SDHDO14521 159 aa16.36■□□□□ 0.21
TPM1-214ENST00000558544 PGRMC2O15173 223 aa16.36■□□□□ 0.21
TPM1-214ENST00000558544 SEC24DO94855 1032 aaPredicted RBP16.36■□□□□ 0.21
TPM1-214ENST00000558544 SDC1P18827 310 aa16.36■□□□□ 0.21
TPM1-214ENST00000558544 TACR1P25103 407 aa16.36■□□□□ 0.21
TPM1-214ENST00000558544 PPP2R1BP30154 601 aa16.36■□□□□ 0.21
TPM1-214ENST00000558544 ALDH9A1P49189 494 aa16.36■□□□□ 0.21
TPM1-214ENST00000558544 OR4D2P58180 307 aa16.36■□□□□ 0.21
TPM1-214ENST00000558544 FOLH1Q04609 750 aa16.36■□□□□ 0.21
TPM1-214ENST00000558544 PCOLCEQ15113 449 aa16.36■□□□□ 0.21
TPM1-214ENST00000558544 SFT2D3Q587I9 215 aa16.36■□□□□ 0.21
TPM1-214ENST00000558544 GPR155Q7Z3F1 870 aa16.36■□□□□ 0.21
TPM1-214ENST00000558544 MAVSQ7Z434 540 aa16.36■□□□□ 0.21
TPM1-214ENST00000558544 DNAJB14Q8TBM8 379 aa16.36■□□□□ 0.21
TPM1-214ENST00000558544 TANKQ92844 425 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms