RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 SOX3P41225 446 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 SSR2P43308 183 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 KIR3DL1P43629 444 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 RAP1GDS1P52306 607 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 PLTPP55058 493 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 RNF4P78317 190 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 PCDH1Q08174 1060 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 NAB1Q13506 487 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 SLMAPQ14BN4 828 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 KBTBD12Q3ZCT8 623 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 OR4C11Q6IEV9 310 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 CEP128Q6ZU80 1094 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 ISCA2Q86U28 154 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 CCDC25Q86WR0 208 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 LAS2Q8IYD9 372 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 ZNF295-AS1Q8N0V1 137 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 GOLM1Q8NBJ4 401 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 OR7G3Q8NG95 312 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 OR52N2Q8NGI0 321 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 LILRB4Q8NHJ6 448 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 ZNF473Q8WTR7 871 aaKnown RBP12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 TANKQ92844 425 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 ART5Q96L15 291 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 DGAT2Q96PD7 388 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 CSF3RQ99062 836 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 MS4A8Q9BY19 250 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 LIN28AQ9H9Z2 209 aaKnown RBP12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 KCNJ16Q9NPI9 418 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 PLSCR2Q9NRY7 297 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 PCDHGA11Q9Y5H2 935 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 PDZD2O15018 2839 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 C19orf84I3L1E1 186 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 BCKDKO14874 412 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 RAD51CO43502 376 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 PRKNO60260 465 aaPredicted RBP12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 PRAMEF4O60810 478 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 KERAO60938 352 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 LDB3O75112 727 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 TGFB1P01137 390 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 CD22P20273 847 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 PTX3P26022 381 aaPredicted RBP12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 PIK3CBP42338 1070 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 MAGEA4P43358 317 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 HK2P52789 917 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 ARFIP1P53367 373 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 PHEXP78562 749 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 MRPS25P82663 173 aaKnown RBP12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 SLAMF1Q13291 335 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 E2F2Q14209 437 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 CDSNQ15517 529 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 FAM83EQ2M2I3 478 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 MPEG1Q2M385 716 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 DEPDC1Q5TB30 811 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 PRAMEF9Q5VWM5 478 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 KHDRBS2Q5VWX1 349 aaKnown RBP12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 ADNP2Q6IQ32 1131 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 MEX3BQ6ZN04 569 aaKnown RBP12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 C16orf47Q6ZP98 133 aaPredicted RBP12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 FAM47EQ6ZV65 393 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 GPR180Q86V85 440 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 SLC2A12Q8TD20 617 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 REPS1Q96D71 796 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 SENP5Q96HI0 755 aaPredicted RBP12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 MAPKAP1Q9BPZ7 522 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 ENKD1Q9H0I2 346 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 RPF2Q9H7B2 306 aaKnown RBP12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 IL1RL2Q9HB29 575 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 SLC24A3Q9HC58 644 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 SACM1LQ9NTJ5 587 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 PHF11Q9UIL8 331 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 ADGRG4Q8IZF6 3080 aa12.62□□□□□ -0.39
SNRPA1-204ENST00000558020 FBN2P35556 2912 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 A0A087X1B8 175 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 SCELO95171 688 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 SLC35E2BP0CK96 405 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 EPORP19235 508 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 CASQ1P31415 396 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 BUD31P41223 144 aaPredicted RBP12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 STT3AP46977 705 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 GPX6P59796 221 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 PLIN5Q00G26 463 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 PMPCAQ10713 525 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 SLC10A1Q14973 349 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 ZNF750Q32MQ0 723 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 GXYLT1Q4G148 440 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 LIPJQ5W064 366 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 GRHL2Q6ISB3 625 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 KLC3Q6P597 504 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 NCCRP1Q6ZVX7 275 aaPredicted RBP12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 UBE3DQ7Z6J8 389 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 MYLK4Q86YV6 388 aaPredicted RBP12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 DND1Q8IYX4 353 aaKnown RBP12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 FAM109AQ8N4B1 249 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 SLC15A4Q8N697 577 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 OR5M3Q8NGP4 307 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 RHEBL1Q8TAI7 183 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 SLC22A8Q8TCC7 542 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 SCYL1Q96KG9 808 aa12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 PELOQ9BRX2 385 aaKnown RBP12.61□□□□□ -0.39
SNRPA1-204ENST00000558020 TTTY12Q9BZ98 90 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms