RNA–Protein interactions for RNA: ENST00000558014.5

SEMA6D-208, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 6,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-208ENST00000558014 PDLIM1O00151 329 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 PORP16435 677 aaPredicted RBP13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 ZNF28P17035 718 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 DSG2Q14126 1118 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 GBX1Q14549 363 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 SWI5Q1ZZU3 235 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 RABL3Q5HYI8 236 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 ZNF678Q5SXM1 525 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 PARS2Q7L3T8 475 aaKnown RBP13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 ERI1Q8IV48 349 aaKnown RBP13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 FAM240BA0A1B0GVZ2 78 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 GPIP06744 558 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 DNAJA1P31689 397 aaKnown RBP13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 KLHL22Q53GT1 634 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 CNDP2Q96KP4 475 aaKnown RBP13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 ALPK1Q96QP1 1244 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 ZFYVE21Q9BQ24 234 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 EIF3KQ9UBQ5 218 aaKnown RBP13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 TMED5Q9Y3A6 229 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 VSTM2BA6NLU5 285 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 E7ENX8 843 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 HMGN1P05114 100 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 CD79AP11912 226 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 CERS1P27544 350 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 VBP1P61758 197 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 RBM39Q14498 530 aaKnown RBP13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 HNRNPA1L2Q32P51 320 aaKnown RBP13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 MARCH8Q5T0T0 291 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 C9orf135Q5VTT2 229 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 ZDHHC14Q8IZN3 488 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 LMNTD1Q8N9Z9 388 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 TMEM41AQ96HV5 264 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 DUSP23Q9BVJ7 150 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 CHIAQ9BZP6 476 aa13.12□□□□□ -0.31
SEMA6D-208ENST00000558014 KAT6AQ92794 2004 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 HTR3EA5X5Y0 456 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 ARPC4P59998 168 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 PRKCDQ05655 676 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 TPRG1LQ5T0D9 272 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 ZDHHC24Q6UX98 284 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 SMIM14Q96QK8 99 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 ALOXE3Q9BYJ1 711 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 PRSS51A0A1B0GVH4 220 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 AIREO43918 545 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 NAA10P41227 235 aaPredicted RBP13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 EEFSECP57772 596 aaKnown RBP13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 KCNC3Q14003 757 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 ABRAXAS2Q15018 415 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 OCLNQ16625 522 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 PARM1Q6UWI2 310 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 TRAPPC6BQ86SZ2 158 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 FAM86B1Q8N7N1 296 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 HUS1BQ8NHY5 278 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 ZNF778Q96MU6 729 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 COQ10BQ9H8M1 238 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 MRM3Q9HC36 420 aaKnown RBP13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 C4BP0C0L5 1744 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 ATE1O95260 518 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 NR1H2P55055 460 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 ZNF613Q6PF04 617 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 SVOPLQ8N434 492 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 ARL14Q8N4G2 192 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 ZNF615Q8N8J6 731 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 OR5K1Q8NHB7 308 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 ERMAPQ96PL5 475 aaPredicted RBP13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 MUC13Q9H3R2 512 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 IGKV6-21A0A0C4DH24 114 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 PRSS38A1L453 326 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 ARPC2O15144 300 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 FNTBP49356 437 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 TIGD6Q17RP2 521 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 TCTE1Q5JU00 501 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 NATD1Q8N6N6 113 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 C10orf82Q8WW14 230 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 SPRYD4Q8WW59 207 aaPredicted RBP13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 PIK3R3Q92569 461 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 MRPL38Q96DV4 380 aaKnown RBP13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 NAA11Q9BSU3 229 aaPredicted RBP13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 DNAJB9Q9UBS3 223 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 RSL24D1Q9UHA3 163 aaKnown RBP13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 OARD1Q9Y530 152 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 C5orf51A6NDU8 294 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 C17orf105B2RV13 164 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 GJB3O75712 270 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 ERCC1P07992 297 aaPredicted RBP13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 ATF6P18850 670 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 PEX2P28328 305 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 OR1D4P47884 311 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 ARSFP54793 590 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 ZXDBP98169 803 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 GRIK2Q13002 908 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 E2F2Q14209 437 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 LINC00696Q6ZRV3 163 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 STX12Q86Y82 276 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 TWSG1Q9GZX9 223 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 UBE2ZQ9H832 354 aaPredicted RBP13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 EBF2Q9HAK2 575 aa13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 FARSAQ9Y285 508 aaKnown RBP13.11□□□□□ -0.31
SEMA6D-208ENST00000558014 TOPAZ1Q8N9V7 1692 aa13.1□□□□□ -0.31
SEMA6D-208ENST00000558014 TOR1BO14657 336 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms