RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 SDCCAG3Q96C92 435 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 CMTM7Q96FZ5 175 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 ATOH8Q96SQ7 321 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 IGSF5Q9NSI5 407 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 DEPPQ9NTK1 212 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 COQ3Q9NZJ6 369 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 ADGRE2Q9UHX3 823 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 ACOT9Q9Y305 439 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 APCP25054 2843 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 A0A087X1B8 175 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 TMEM200CA6NKL6 621 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 FAM166BA8MTA8 275 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 ADAM10O14672 748 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 DYRK3O43781 588 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 PDE9AO76083 593 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 SCELO95171 688 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 ELAVL4P26378 380 aaKnown RBP13.58□□□□□ -0.24
SHMT2-235ENST00000557740 HK2P52789 917 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 PPIAP62937 165 aaKnown RBP13.58□□□□□ -0.24
SHMT2-235ENST00000557740 PHEXP78562 749 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 E2F2Q14209 437 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 FAM83EQ2M2I3 478 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 GRHL2Q6ISB3 625 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 PAOXQ6QHF9 649 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 ZDHHC24Q6UX98 284 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 RTL4Q6ZR62 310 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 GK5Q6ZS86 529 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 CCDC91Q7Z6B0 441 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 TEX9Q8N6V9 391 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 OR2M7Q8NG81 312 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 OR5L2Q8NGL0 311 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 OR8K3Q8NH51 312 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 KCTD4Q8WVF5 259 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 NXNL1Q96CM4 212 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 TRIM8Q9BZR9 551 aa13.58□□□□□ -0.24
SHMT2-235ENST00000557740 NCOA6Q14686 2063 aaPredicted RBP13.58□□□□□ -0.24
SHMT2-235ENST00000557740 A0A0G2JMM0 328 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 A0A1W2PPB8 328 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 A0A1W2PRS3 328 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 KIR3DP1A8MWS1 328 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 G3V3Y1 287 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 C19orf84I3L1E1 186 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 FGF17O60258 216 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 GFAPP14136 432 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 RNF4P78317 190 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 PLIN5Q00G26 463 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 PCDH1Q08174 1060 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 TMEM211Q6ICI0 200 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 OR4C11Q6IEV9 310 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 OPN5Q6U736 354 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 RGS9BPQ6ZS82 235 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 SLC22A16Q86VW1 577 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 ZNF321PQ8N8H1 164 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 OR52N2Q8NGI0 321 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 HUS1BQ8NHY5 278 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 RGMAQ96B86 450 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 ANKRD9Q96BM1 317 aaPredicted RBP13.57□□□□□ -0.24
SHMT2-235ENST00000557740 MRRFQ96E11 262 aaKnown RBP13.57□□□□□ -0.24
SHMT2-235ENST00000557740 LURAP1Q96LR2 239 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 DGAT2Q96PD7 388 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 TTTY12Q9BZ98 90 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 DEFB127Q9H1M4 99 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 OR51B5Q9H339 312 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 TP63Q9H3D4 680 aaPredicted RBP13.57□□□□□ -0.24
SHMT2-235ENST00000557740 ACTR8Q9H981 624 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 SNX15Q9NRS6 342 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 PLSCR2Q9NRY7 297 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 MS4A12Q9NXJ0 267 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 PHF11Q9UIL8 331 aa13.57□□□□□ -0.24
SHMT2-235ENST00000557740 CCDC189A1A4V9 331 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 SSTR2P30874 369 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 TLX1P31314 330 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-235ENST00000557740 PIK3CBP42338 1070 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 STT3AP46977 705 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 ETF1P62495 437 aaKnown RBP13.56□□□□□ -0.24
SHMT2-235ENST00000557740 IRF9Q00978 393 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 SETDB1Q15047 1291 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 TRADDQ15628 312 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 UAP1Q16222 522 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-235ENST00000557740 ZNF750Q32MQ0 723 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 DEPDC1Q5TB30 811 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 NDUFAF5Q5TEU4 345 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 MROH9Q5TGP6 573 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 C8orf74Q6P047 294 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 KLC3Q6P597 504 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 SYT10Q6XYQ8 523 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 CEP128Q6ZU80 1094 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 FAM47EQ6ZV65 393 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 CENPLQ8N0S6 344 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-235ENST00000557740 C17orf53Q8N3J3 647 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-235ENST00000557740 GOLM1Q8NBJ4 401 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 RHEBL1Q8TAI7 183 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 ZNF721Q8TF20 911 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 CHTF18Q8WVB6 975 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 REPS1Q96D71 796 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 RBM18Q96H35 190 aaKnown RBP13.56□□□□□ -0.24
SHMT2-235ENST00000557740 SCYL1Q96KG9 808 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 ART5Q96L15 291 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 SGCZQ96LD1 299 aa13.56□□□□□ -0.24
SHMT2-235ENST00000557740 MTERF1Q99551 399 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms