RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 SPACA9Q96E40 222 aaPredicted RBP8.55□□□□□ -1.04
PABPN1-208ENST00000557702 C1orf159Q96HA4 380 aa8.55□□□□□ -1.04
PABPN1-208ENST00000557702 BPIFA3Q9BQP9 254 aa8.55□□□□□ -1.04
PABPN1-208ENST00000557702 OR8D2Q9GZM6 311 aa8.55□□□□□ -1.04
PABPN1-208ENST00000557702 NAT10Q9H0A0 1025 aaKnown RBP8.55□□□□□ -1.04
PABPN1-208ENST00000557702 GRPEL1Q9HAV7 217 aa8.55□□□□□ -1.04
PABPN1-208ENST00000557702 CATSPERZQ9NTU4 200 aa8.55□□□□□ -1.04
PABPN1-208ENST00000557702 RIMKLBQ9ULI2 386 aa8.55□□□□□ -1.04
PABPN1-208ENST00000557702 KCNS2Q9ULS6 477 aa8.55□□□□□ -1.04
PABPN1-208ENST00000557702 MAPRE3Q9UPY8 281 aa8.55□□□□□ -1.04
PABPN1-208ENST00000557702 CLDN16Q9Y5I7 305 aa8.55□□□□□ -1.04
PABPN1-208ENST00000557702 CHCHD2Q9Y6H1 151 aaPredicted RBP8.55□□□□□ -1.04
PABPN1-208ENST00000557702 IKBKGQ9Y6K9 419 aa8.55□□□□□ -1.04
PABPN1-208ENST00000557702 YLPM1P49750 1951 aaKnown RBP8.55□□□□□ -1.04
PABPN1-208ENST00000557702 FRG2CA6NGY1 282 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 H0Y3Z8 333 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 APOC4-APOC2K7ER74 178 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 CD3EAPO15446 510 aaKnown RBP8.54□□□□□ -1.04
PABPN1-208ENST00000557702 OR1F1O43749 312 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 NRDCO43847 1150 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 TRIM3O75382 744 aaPredicted RBP8.54□□□□□ -1.04
PABPN1-208ENST00000557702 ACTL6AO96019 429 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 APOC2P02655 101 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 SOD3P08294 240 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 CPN1P15169 458 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 ZNF16P17020 682 aaPredicted RBP8.54□□□□□ -1.04
PABPN1-208ENST00000557702 ITGA2P17301 1181 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 IMPA1P29218 277 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 GCKP35557 465 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 HNF4AP41235 474 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 RAB8AP61006 207 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 TBPL1P62380 186 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 CCZ1BP86790 482 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 CCZ1P86791 482 aaPredicted RBP8.54□□□□□ -1.04
PABPN1-208ENST00000557702 MYL5Q02045 173 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 SRYQ05066 204 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 PARP6Q2NL67 630 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 EIPR1Q53HC9 387 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 ACSBG2Q5FVE4 666 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 CTSL3PQ5NE16 218 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 TBCELQ5QJ74 424 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 ANKRD34AQ69YU3 496 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 DARS2Q6PI48 645 aaKnown RBP8.54□□□□□ -1.04
PABPN1-208ENST00000557702 ADGRE4PQ86SQ3 457 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 LINC00523Q86TU6 105 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 SLC15A4Q8N697 577 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 ZNF321PQ8N8H1 164 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 RNF214Q8ND24 703 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 OR10H5Q8NGA6 315 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 OR10G3Q8NGC4 313 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 OR14A16Q8NHC5 309 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 NT5CQ8TCD5 201 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 PTPMT1Q8WUK0 201 aaPredicted RBP8.54□□□□□ -1.04
PABPN1-208ENST00000557702 FAM136AQ96C01 138 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 REPS1Q96D71 796 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 STARD4Q96DR4 205 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 PGM2Q96G03 612 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 PLPPR2Q96GM1 343 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 ZNF778Q96MU6 729 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 TMEM204Q9BSN7 226 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 PACSIN1Q9BY11 444 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 PHACTR1Q9C0D0 580 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 UBQLN3Q9H347 655 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 CHODLQ9H9P2 273 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 ZNHIT6Q9NWK9 470 aaKnown RBP8.54□□□□□ -1.04
PABPN1-208ENST00000557702 MARCH4Q9P2E8 410 aaPredicted RBP8.54□□□□□ -1.04
PABPN1-208ENST00000557702 COPS7AQ9UBW8 275 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.54□□□□□ -1.048e-16■■■□□ 16.3
PABPN1-208ENST00000557702 TENM1Q9UKZ4 2725 aa8.54□□□□□ -1.04
PABPN1-208ENST00000557702 PRKDCP78527 4128 aaKnown RBP8.53□□□□□ -1.04
PABPN1-208ENST00000557702 H3BMM5 538 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 TGFBR3LH3BV60 316 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 PSMD3O43242 534 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 SPOPO43791 374 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 ZBTB14O43829 449 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 SSX4O60224 188 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 OR10H2O60403 315 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 DLX3O60479 287 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 NDUFS7O75251 213 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 SNX4O95219 450 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 LRATO95237 230 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 CRHP06850 196 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 THBS1P07996 1170 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 DANCRP0C864 163 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 IGHV4-31P0DP07 118 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 RBP3P10745 1247 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 CDH1P12830 882 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 TNNI3P19429 210 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 TBXA2RP21731 343 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 ADRA1DP25100 572 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 SERPINB3P29508 390 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 FMO4P31512 558 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 SKIV2L2P42285 1042 aaKnown RBP8.53□□□□□ -1.04
PABPN1-208ENST00000557702 COMPP49747 757 aaPredicted RBP8.53□□□□□ -1.04
PABPN1-208ENST00000557702 CCR8P51685 355 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 NAGLUP54802 743 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 DSCR9P59020 149 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 ACVR1Q04771 509 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 IQCB1Q15051 598 aa8.53□□□□□ -1.04
PABPN1-208ENST00000557702 PRR31Q5SQ13 230 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms