RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 ANAPC1Q9H1A4 1944 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 REV1Q9UBZ9 1251 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 MBD1Q9UIS9 605 aaPredicted RBP15.54■□□□□ 0.08
SHMT2-232ENST00000557487 RAB23Q9ULC3 237 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 ICKQ9UPZ9 632 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 M0R129 80 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 TPST2O60704 377 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 ALX3O95076 343 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 ADRA2AP08913 450 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 IMPA1P29218 277 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 SLC5A12Q1EHB4 618 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 BRAT1Q6PJG6 821 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 RFLNAQ6ZTI6 216 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 DDX53Q86TM3 631 aaKnown RBP15.53■□□□□ 0.08
SHMT2-232ENST00000557487 GATAD2AQ86YP4 633 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 LIX1LQ8IVB5 337 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 HS6ST3Q8IZP7 471 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 ARL14EPQ8N8R7 260 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-232ENST00000557487 C16orf78Q8WTQ4 265 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 GDF15Q99988 308 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 ZSCAN5AQ9BUG6 496 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 PRM3Q9NNZ6 103 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 A4GALTQ9NPC4 353 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 ISYNA1Q9NPH2 558 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 HCSTQ9UBK5 93 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 MAFFQ9ULX9 164 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 NUP214P35658 2090 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-232ENST00000557487 A0A1W2PQ09 198 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 A0A1W2PRB8 838 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 PITPNM1O00562 1244 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 MYL12BO14950 172 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 ATG13O75143 517 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 CLTBP09497 229 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 HLA-DMAP28067 261 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 VIPR1P32241 457 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 CD70P32970 193 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 WDR5P61964 334 aaKnown RBP15.53■□□□□ 0.08
SHMT2-232ENST00000557487 C2orf80Q0P641 193 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 BAK1Q16611 211 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 NDUFA9Q16795 377 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 DCST1Q5T197 706 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 NOXA1Q86UR1 476 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 CRIPAKQ8N1N5 446 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 LINC00471Q8N535 108 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 DBF4BQ8NFT6 615 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 APOBEC4Q8WW27 367 aaKnown RBP15.53■□□□□ 0.08
SHMT2-232ENST00000557487 UBE2E3Q969T4 207 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 NEDD4LQ96PU5 975 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 PKP4Q99569 1192 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 NLNQ9BYT8 704 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 POLR2J2Q9GZM3 115 aaKnown RBP15.53■□□□□ 0.08
SHMT2-232ENST00000557487 DMRT3Q9NQL9 472 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 SNTG1Q9NSN8 517 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 TBC1D14Q9P2M4 693 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 SLC25A13Q9UJS0 675 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 SLC6A14Q9UN76 642 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 DIMT1Q9UNQ2 313 aaKnown RBP15.53■□□□□ 0.08
SHMT2-232ENST00000557487 DYRK1BQ9Y463 629 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 MAP4K5Q9Y4K4 846 aa15.53■□□□□ 0.08
SHMT2-232ENST00000557487 SLC5A10A0PJK1 596 aa15.52■□□□□ 0.07
SHMT2-232ENST00000557487 STK25O00506 426 aa15.52■□□□□ 0.07
SHMT2-232ENST00000557487 KIAA0355O15063 1070 aa15.52■□□□□ 0.07
SHMT2-232ENST00000557487 PQBP1O60828 265 aaKnown RBP15.52■□□□□ 0.07
SHMT2-232ENST00000557487 POU1F1P28069 291 aa15.52■□□□□ 0.07
SHMT2-232ENST00000557487 GSTM5P46439 218 aa15.52■□□□□ 0.07
SHMT2-232ENST00000557487 HYAL2Q12891 473 aa15.52■□□□□ 0.07
SHMT2-232ENST00000557487 TP53BP2Q13625 1128 aa15.52■□□□□ 0.07
SHMT2-232ENST00000557487 GANABQ14697 944 aaKnown RBP15.52■□□□□ 0.07
SHMT2-232ENST00000557487 GPAT3Q53EU6 434 aa15.52■□□□□ 0.07
SHMT2-232ENST00000557487 DDI2Q5TDH0 399 aa15.52■□□□□ 0.07
SHMT2-232ENST00000557487 TIGD3Q6B0B8 471 aa15.52■□□□□ 0.07
SHMT2-232ENST00000557487 KIAA1211LQ6NV74 962 aa15.52■□□□□ 0.07
SHMT2-232ENST00000557487 VASH1Q7L8A9 365 aaPredicted RBP15.52■□□□□ 0.07
SHMT2-232ENST00000557487 LAX1Q8IWV1 398 aa15.52■□□□□ 0.07
SHMT2-232ENST00000557487 PHC2Q8IXK0 858 aa15.52■□□□□ 0.07
SHMT2-232ENST00000557487 FAM26EQ8N5C1 309 aa15.52■□□□□ 0.07
SHMT2-232ENST00000557487 LMLNQ96KR4 655 aa15.52■□□□□ 0.07
SHMT2-232ENST00000557487 SLC22A12Q96S37 553 aa15.52■□□□□ 0.07
SHMT2-232ENST00000557487 TMEM246Q9BRR3 403 aa15.52■□□□□ 0.07
SHMT2-232ENST00000557487 GON7Q9BXV9 100 aa15.52■□□□□ 0.07
SHMT2-232ENST00000557487 KRT87PA6NCN2 255 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 WASH3PC4AMC7 463 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 C5orf58C9J3I9 102 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 GRM6O15303 877 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 SLC16A8O95907 504 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 CYP17A1P05093 508 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 C1GALT1C1LP0DN25 315 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 CPEP16870 476 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 PTBP1P26599 531 aaKnown RBP eCLIP15.51■□□□□ 0.07
SHMT2-232ENST00000557487 IRS1P35568 1242 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 SOX3P41225 446 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 SLC9A3P48764 834 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 XKP51811 444 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 SEMG2Q02383 582 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 ZNF91Q05481 1191 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 COX10Q12887 443 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 HEPACAMQ14CZ8 416 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 SLC35F1Q5T1Q4 408 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 PDZK1Q5T2W1 519 aa15.51■□□□□ 0.07
SHMT2-232ENST00000557487 FAM131AQ6UXB0 335 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms