RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.99□□□□□ -0.49
APEX1-216ENST00000557159 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.99□□□□□ -0.49
APEX1-216ENST00000557159 GRXCR1A8MXD5 290 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 CACNB4O00305 520 aaPredicted RBP11.99□□□□□ -0.49
APEX1-216ENST00000557159 RNASET2O00584 256 aaKnown RBP11.99□□□□□ -0.49
APEX1-216ENST00000557159 SCAMP2O15127 329 aaKnown RBP11.99□□□□□ -0.49
APEX1-216ENST00000557159 TNFRSF21O75509 655 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 TBX18O95935 607 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 HBQ1P09105 142 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 JUPP14923 745 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 ARSBP15848 533 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 DDX5P17844 614 aaKnown RBP11.99□□□□□ -0.49
APEX1-216ENST00000557159 FGF9P31371 208 aaPredicted RBP11.99□□□□□ -0.49
APEX1-216ENST00000557159 CNR2P34972 360 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 DAB2P98082 770 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 HOXC5Q00444 222 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 PLK5Q496M5 336 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 TRIQKQ629K1 86 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 C12orf73Q69YU5 71 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 BICRALQ6AI39 1079 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 NCEH1Q6PIU2 408 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 KLHL17Q6TDP4 642 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 TMC8Q8IU68 726 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 LKAAEAR1Q8TD35 194 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 SP7Q8TDD2 431 aaPredicted RBP11.99□□□□□ -0.49
APEX1-216ENST00000557159 AKAP1Q92667 903 aaKnown RBP eCLIP11.99□□□□□ -0.49
APEX1-216ENST00000557159 EXOC2Q96KP1 924 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 KCTD7Q96MP8 289 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 QRFPRQ96P65 431 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 C1QTNF7Q9BXJ2 289 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 BEX2Q9BXY8 128 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 POLR2J2Q9GZM3 115 aaKnown RBP11.99□□□□□ -0.49
APEX1-216ENST00000557159 WDR70Q9NW82 654 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 KCTD5Q9NXV2 234 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 TMCC3Q9ULS5 477 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 VPS4AQ9UN37 437 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 DIMT1Q9UNQ2 313 aaKnown RBP11.99□□□□□ -0.49
APEX1-216ENST00000557159 HSPB11Q9Y547 144 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 ENPP4Q9Y6X5 453 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 PIKFYVEQ9Y2I7 2098 aa11.99□□□□□ -0.49
APEX1-216ENST00000557159 H3BNC9 293 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 TLR4O00206 839 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 GAPDHSO14556 408 aaPredicted RBP11.98□□□□□ -0.49
APEX1-216ENST00000557159 LYRM1O43325 122 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 ENTPD6O75354 484 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 LRATO95237 230 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 C1QCP02747 245 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 SRPRAP08240 638 aaKnown RBP11.98□□□□□ -0.49
APEX1-216ENST00000557159 C1SP09871 688 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 SLC2A2P11168 524 aaPredicted RBP11.98□□□□□ -0.49
APEX1-216ENST00000557159 OSMP13725 252 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 ATF6P18850 670 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 ACRV1P26436 265 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 TALDO1P37837 337 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 SOX3P41225 446 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 STK19P49842 368 aaPredicted RBP11.98□□□□□ -0.49
APEX1-216ENST00000557159 MVDP53602 400 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 PTPN5P54829 565 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 PER3P56645 1201 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 SRP54P61011 504 aaKnown RBP11.98□□□□□ -0.49
APEX1-216ENST00000557159 ABATP80404 500 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 MRPL28Q13084 256 aaKnown RBP11.98□□□□□ -0.49
APEX1-216ENST00000557159 HNRNPA0Q13151 305 aaKnown RBP11.98□□□□□ -0.49
APEX1-216ENST00000557159 ARHGEF7Q14155 803 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 GPR33Q49SQ1 333 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 RTP2Q5QGT7 225 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 LIPJQ5W064 366 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 FAM205BPQ63HN1 556 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 TPGS2Q68CL5 300 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 PAMR1Q6UXH9 720 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 NPAS3Q8IXF0 933 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 GPALPP1Q8IXQ4 340 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 CAMKK1Q8N5S9 505 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 TTC9BQ8N6N2 239 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 ZNF557Q8N988 423 aaPredicted RBP11.98□□□□□ -0.49
APEX1-216ENST00000557159 TOR1AIP2Q8NFQ8 470 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 OR8J1Q8NGP2 316 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 LRRC20Q8TCA0 184 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 PLD4Q96BZ4 506 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 MTFMTQ96DP5 389 aaKnown RBP11.98□□□□□ -0.49
APEX1-216ENST00000557159 C17orf62Q9BQA9 187 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 TMEM43Q9BTV4 400 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 SLC12A9Q9BXP2 914 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 HDHD5Q9BXW7 423 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 RANBP3Q9H6Z4 567 aaPredicted RBP11.98□□□□□ -0.49
APEX1-216ENST00000557159 LIN7BQ9HAP6 207 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 BPIFA1Q9NP55 256 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 SPATA6Q9NWH7 488 aaPredicted RBP11.98□□□□□ -0.49
APEX1-216ENST00000557159 TNFRSF10DQ9UBN6 386 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 NDRG2Q9UN36 371 aaKnown RBP11.98□□□□□ -0.49
APEX1-216ENST00000557159 COLQQ9Y215 455 aaPredicted RBP11.98□□□□□ -0.49
APEX1-216ENST00000557159 KCNE2Q9Y6J6 123 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 STON1Q9Y6Q2 735 aa11.98□□□□□ -0.49
APEX1-216ENST00000557159 A0A1W2PPC1 479 aa11.97□□□□□ -0.49
APEX1-216ENST00000557159 WASHC1A8K0Z3 465 aa11.97□□□□□ -0.49
APEX1-216ENST00000557159 SLC16A5O15375 505 aa11.97□□□□□ -0.49
APEX1-216ENST00000557159 AKR7A2O43488 359 aa11.97□□□□□ -0.49
APEX1-216ENST00000557159 ACSL4O60488 711 aa11.97□□□□□ -0.49
APEX1-216ENST00000557159 CLDN11O75508 207 aa11.97□□□□□ -0.49
APEX1-216ENST00000557159 CPSF4O95639 269 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms