RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 TM4SF19Q96DZ7 209 aa9.28□□□□□ -0.92
HNRNPC-228ENST00000557033 CFAP36Q96G28 342 aa9.28□□□□□ -0.92
HNRNPC-228ENST00000557033 PEX11GQ96HA9 241 aa9.28□□□□□ -0.92
HNRNPC-228ENST00000557033 PWWP2AQ96N64 755 aa9.28□□□□□ -0.92
HNRNPC-228ENST00000557033 SLC29A3Q9BZD2 475 aa9.28□□□□□ -0.92
HNRNPC-228ENST00000557033 ILKAPQ9H0C8 392 aaPredicted RBP9.28□□□□□ -0.92
HNRNPC-228ENST00000557033 ATG10Q9H0Y0 220 aa9.28□□□□□ -0.92
HNRNPC-228ENST00000557033 ARL15Q9NXU5 204 aa9.28□□□□□ -0.92
HNRNPC-228ENST00000557033 NSMCE4AQ9NXX6 385 aa9.28□□□□□ -0.92
HNRNPC-228ENST00000557033 MOCS1Q9NZB8 636 aa9.28□□□□□ -0.92
HNRNPC-228ENST00000557033 MDC1Q14676 2089 aaKnown RBP9.28□□□□□ -0.92
HNRNPC-228ENST00000557033 LOC102723996A0A087X1L8 192 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 NSG1A0A0A6YYJ2 146 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 TCP11X1B4DZS4 312 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 MASP2O00187 686 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 NSA2O95478 260 aaKnown RBP9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 HEXBP07686 556 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 CYC1P08574 325 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 ICAM2P13598 275 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 IL10P22301 178 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 GNLYP22749 145 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 CTSSP25774 331 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 AP2B1P63010 937 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 SRSF1Q07955 248 aaKnown RBP eCLIP9.27□□□□□ -0.931e-22■□□□□ 10.5
HNRNPC-228ENST00000557033 PDIA2Q13087 525 aaKnown RBP9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 RAB39AQ14964 217 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 PHKG1Q16816 387 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 CRB2Q5IJ48 1285 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 LCE2AQ5TA79 106 aaPredicted RBP9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 FHL5Q5TD97 284 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 TMEM205Q6UW68 189 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 C16orf54Q6UWD8 224 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 ISLR2Q6UXK2 745 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 CYS1Q717R9 158 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 SPPL2CQ8IUH8 684 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 PLD3Q8IV08 490 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 KBTBD2Q8IY47 623 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 MFSD9Q8NBP5 474 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 FBXO36Q8NEA4 188 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 ABHD11Q8NFV4 315 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 OR56A3Q8NH54 315 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 PPP4R1Q8TF05 950 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 SNRNP40Q96DI7 357 aaKnown RBP9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 THOC3Q96J01 351 aaKnown RBP9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 KRT12Q99456 494 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 WDR77Q9BQA1 342 aaPredicted RBP9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 WDR83Q9BRX9 315 aaKnown RBP9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 TRIM51Q9BSJ1 452 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 EPS8L2Q9H6S3 715 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 ZBTB20Q9HC78 741 aaPredicted RBP9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 SACM1LQ9NTJ5 587 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 PYCARDQ9ULZ3 195 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 SNX24Q9Y343 169 aa9.27□□□□□ -0.93
HNRNPC-228ENST00000557033 IGHV1-45A0A0A0MS14 117 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 SYT5O00445 386 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 EIF3HO15372 352 aaKnown RBP eCLIP9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 P2RX6O15547 441 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 LCMT2O60294 686 aaKnown RBP9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 TMEM127O75204 238 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 BMP10O95393 424 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 SERPINA7P05543 415 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 RPL21P46778 160 aaKnown RBP9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 GLRBP48167 497 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 CCR8P51685 355 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 ARFIP2P53365 341 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 CHRNEQ04844 493 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 Q0VFX4 171 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 CALCOCO2Q13137 446 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 MFAP5Q13361 173 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 ZXDCQ2QGD7 858 aaPredicted RBP9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 NIPAL1Q6NVV3 410 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 MBOAT1Q6ZNC8 495 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 VN1R4Q7Z5H5 301 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 ASPGQ86U10 573 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 ZC3HC1Q86WB0 502 aaKnown RBP9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 PRSS58Q8IYP2 241 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 TBC1D19Q8N5T2 526 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 SPATA4Q8NEY3 305 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 DNAJB14Q8TBM8 379 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 PYROXD1Q8WU10 500 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 SLC13A3Q8WWT9 602 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 FBXL8Q96CD0 374 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 VPS39Q96JC1 886 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 BARD1Q99728 777 aaKnown RBP9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 OLFM1Q99784 485 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 ERP44Q9BS26 406 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 BTBD2Q9BX70 525 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 TRIM31Q9BZY9 425 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 MANSC1Q9H8J5 431 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 POPDC3Q9HBV1 291 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 ZNF160Q9HCG1 818 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 ANKHQ9HCJ1 492 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 SERHLQ9NQF3 203 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 AGPAT4Q9NRZ5 378 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 SLC17A6Q9P2U8 582 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 COPG1Q9Y678 874 aaKnown RBP9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 SLC22A7Q9Y694 548 aa9.26□□□□□ -0.93
HNRNPC-228ENST00000557033 A0A1W2PR48 441 aa9.25□□□□□ -0.93
HNRNPC-228ENST00000557033 TRBC2A0A5B9 178 aa9.25□□□□□ -0.93
HNRNPC-228ENST00000557033 FEZF1A0PJY2 475 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms