RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 NADK2Q4G0N4 442 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 CCNYL2Q5T2Q4 361 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 C18orf63Q68DL7 685 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 Q6ZS92 163 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 CLNKQ7Z7G1 428 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 EXOC3L1Q86VI1 746 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 TMEM132CQ8N3T6 1108 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 SIRT6Q8N6T7 355 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 NFAM1Q8NET5 270 aaPredicted RBP10□□□□□ -0.81
LINC00239-201ENST00000556973 B3GNT7Q8NFL0 401 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 DNAJB14Q8TBM8 379 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 CHTF18Q8WVB6 975 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 HAS2Q92819 552 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 ANKRD9Q96BM1 317 aaPredicted RBP10□□□□□ -0.81
LINC00239-201ENST00000556973 GATA5Q9BWX5 397 aaPredicted RBP10□□□□□ -0.81
LINC00239-201ENST00000556973 MFRPQ9BY79 579 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 MRPL1Q9BYD6 325 aaKnown RBP10□□□□□ -0.81
LINC00239-201ENST00000556973 CENPHQ9H3R5 247 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 WDR41Q9HAD4 459 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 ADAP2Q9NPF8 381 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 PNO1Q9NRX1 252 aaKnown RBP10□□□□□ -0.81
LINC00239-201ENST00000556973 PPIEQ9UNP9 301 aaKnown RBP10□□□□□ -0.81
LINC00239-201ENST00000556973 CLDN16Q9Y5I7 305 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 A0A1W2PR48 441 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 DYTNA2CJ06 578 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 TGFBR3LH3BV60 316 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 CDK2AP1O14519 115 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 TM9SF1O15321 606 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 NPHS1O60500 1241 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 MYO1DO94832 1006 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 GPR75O95800 540 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 GBAP04062 536 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 IFNA16P05015 189 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 TNNI3P19429 210 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 TPP2P29144 1249 aaPredicted RBP9.99□□□□□ -0.81
LINC00239-201ENST00000556973 CD97P48960 835 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 CLCN2P51788 898 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 MAPK12P53778 367 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 FOXA1P55317 472 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 IGLV3-21P80748 117 aaPredicted RBP9.99□□□□□ -0.81
LINC00239-201ENST00000556973 FOLH1Q04609 750 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 GALNT1Q10472 559 aaPredicted RBP9.99□□□□□ -0.81
LINC00239-201ENST00000556973 ELAVL1Q15717 326 aaKnown RBP9.99□□□□□ -0.81
LINC00239-201ENST00000556973 TCHHL1Q5QJ38 904 aaPredicted RBP9.99□□□□□ -0.81
LINC00239-201ENST00000556973 ABHD17BQ5VST6 288 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 B3GNTL1Q67FW5 361 aaPredicted RBP9.99□□□□□ -0.81
LINC00239-201ENST00000556973 SLC6A19Q695T7 634 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 COMMD6Q7Z4G1 85 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 TRIM46Q7Z4K8 759 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 LGI4Q8N135 537 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 SLC5A8Q8N695 610 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 AMER2Q8N7J2 671 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 DAZLQ92904 295 aaKnown RBP9.99□□□□□ -0.81
LINC00239-201ENST00000556973 RBM18Q96H35 190 aaKnown RBP9.99□□□□□ -0.81
LINC00239-201ENST00000556973 KCNA7Q96RP8 456 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 RNF32Q9H0A6 362 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 ILKAPQ9H0C8 392 aaPredicted RBP9.99□□□□□ -0.81
LINC00239-201ENST00000556973 STMN4Q9H169 189 aaPredicted RBP9.99□□□□□ -0.81
LINC00239-201ENST00000556973 EML4Q9HC35 981 aaKnown RBP9.99□□□□□ -0.81
LINC00239-201ENST00000556973 SLAMF7Q9NQ25 335 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 ACTL7BQ9Y614 415 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 CLCA3PQ9Y6N3 262 aa9.99□□□□□ -0.81
LINC00239-201ENST00000556973 C1orf226A1L170 272 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 TTLL8A6PVC2 850 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 SLC28A1O00337 649 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 PGRMC2O15173 223 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 DYRK3O43781 588 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 FGF17O60258 216 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 SORBS2O94875 1100 aaKnown RBP9.98□□□□□ -0.81
LINC00239-201ENST00000556973 BPGMP07738 259 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 FGF4P08620 206 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 NR2F6P10588 404 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 COX7A2P14406 83 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 PLA2G2AP14555 144 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 CHN1P15882 459 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 SERPINB3P29508 390 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 SERPINB5P36952 375 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 ETV4P43268 484 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 STT3AP46977 705 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 HTR6P50406 440 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 GPR143P51810 404 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 TRA2BP62995 288 aaKnown RBP9.98□□□□□ -0.81
LINC00239-201ENST00000556973 ARG2P78540 354 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 TLE1Q04724 770 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 TLR1Q15399 786 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 SPIN4Q56A73 249 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 ACER2Q5QJU3 275 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 NDUFAF5Q5TEU4 345 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 RPS19BP1Q86WX3 136 aaKnown RBP9.98□□□□□ -0.81
LINC00239-201ENST00000556973 OR4N5Q8IXE1 308 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 C1orf52Q8N6N3 182 aaKnown RBP9.98□□□□□ -0.81
LINC00239-201ENST00000556973 APCDD1LQ8NCL9 501 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 MORN4Q8NDC4 146 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 CATSPER1Q8NEC5 780 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 OR14A16Q8NHC5 309 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 PTPMT1Q8WUK0 201 aaPredicted RBP9.98□□□□□ -0.81
LINC00239-201ENST00000556973 VMP1Q96GC9 406 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 DGAT2Q96PD7 388 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 HBEGFQ99075 208 aa9.98□□□□□ -0.81
LINC00239-201ENST00000556973 PELOQ9BRX2 385 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms