RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 TTLL2Q9BWV7 592 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 MARK1Q9P0L2 795 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 MBD2Q9UBB5 411 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 EIF3FO00303 357 aaPredicted RBP14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 IGFBP6P24592 240 aaPredicted RBP14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 HSD17B2P37059 387 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 CDKN2CP42773 168 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 AKR1D1P51857 326 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 STXBP1P61764 594 aaKnown RBP14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 CDKL4Q5MAI5 379 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 SAMD12Q8N8I0 201 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 GDPD1Q8N9F7 314 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 RFT1Q96AA3 541 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 CLIP3Q96DZ5 547 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 MRPS30Q9NP92 439 aaKnown RBP14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 EVPLQ92817 2033 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 UNCXA6NJT0 531 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 DUXAA6NLW8 204 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 J3QLW9 94 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 INPPL1O15357 1258 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 EPHX1P07099 455 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 ZNF19P17023 458 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 MNDAP41218 407 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 CLK3P49761 638 aaKnown RBP14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 CLCN7P51798 805 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 GP2P55259 537 aaKnown RBP14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 SNRPD2P62316 118 aaKnown RBP14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 RPL6Q02878 288 aaKnown RBP14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 FAM219BQ5XKK7 198 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 GDPGP1Q6ZNW5 385 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 TIGD4Q8IY51 512 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 PSD4Q8NDX1 1056 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 OR51G2Q8NGK0 314 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 SETD6Q8TBK2 473 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 ZCCHC10Q8TBK6 192 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 GNPDA2Q8TDQ7 276 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 GPR151Q8TDV0 419 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 MBOAT4Q96T53 435 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 TMEM30AQ9NV96 361 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 N6AMT1Q9Y5N5 214 aa14.39□□□□□ -0.11
ARHGEF40-207ENST00000556399 FAM47E-STBD1D6RA91 191 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 H7C0S8 307 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 ATF6P18850 670 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 PTNP21246 168 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 PSMA3P25788 255 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 TNFSF8P32971 234 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 SKP1P63208 163 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 TRAM2Q15035 370 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 COMMD6Q7Z4G1 85 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 RNF175Q8N4F7 328 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 TMEM151AQ8N4L1 468 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 SGCDQ92629 289 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 VMP1Q96GC9 406 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 SMG9Q9H0W8 520 aaKnown RBP14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 RNF121Q9H920 327 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 BEX1Q9HBH7 125 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 ZFR2Q9UPR6 939 aaKnown RBP14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 INSL5Q9Y5Q6 135 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 PHIPQ8WWQ0 1821 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 CACNB4O00305 520 aaPredicted RBP14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 FGF19O95750 216 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 CAPNS1P04632 268 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 C8orf89P0DMQ9 161 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 HK3P52790 923 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 ZNF155Q12901 538 aaPredicted RBP14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 SPATC1Q76KD6 591 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 COMMD2Q86X83 199 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 IQCF1Q8N6M8 205 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 DTX3Q8N9I9 347 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 OSTF1Q92882 214 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 RWDD3Q9Y3V2 267 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 GLOD5A6NK44 160 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 FAM25EA8MYX2 175 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 MMP20O60882 483 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 SULT1C4O75897 302 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 MMP2P08253 660 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 F8A1P23610 371 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 HOXD9P28356 352 aaPredicted RBP14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 SUOXP51687 545 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 GPR68Q15743 365 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 NADSYN1Q6IA69 706 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 GRHL2Q6ISB3 625 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 C6orf120Q7Z4R8 191 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 NOXA1Q86UR1 476 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 COX18Q8N8Q8 333 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 KREMEN2Q8NCW0 462 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 GPR26Q8NDV2 337 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 TTLQ8NG68 377 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 SMPDL3AQ92484 453 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 HDHD5Q9BXW7 423 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 ADAP2Q9NPF8 381 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 NUP205Q92621 2012 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 MEIOCA2RUB1 952 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 NPIPB15A6NHN6 443 aaPredicted RBP14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 NUDT7P0C024 238 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 MAZP56270 477 aaKnown RBP14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 HLA-DQA1Q5Y7H0 255 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 FAM180BQ6P0A1 224 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 ZNF613Q6PF04 617 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 SBSNQ6UWP8 590 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms